Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34265 | 103018;103019;103020 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
N2AB | 32624 | 98095;98096;98097 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
N2A | 31697 | 95314;95315;95316 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
N2B | 25200 | 75823;75824;75825 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
Novex-1 | 25325 | 76198;76199;76200 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
Novex-2 | 25392 | 76399;76400;76401 | chr2:178533822;178533821;178533820 | chr2:179398549;179398548;179398547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1559030437 | None | 0.026 | N | 0.305 | 0.323 | 0.369867359543 | gnomAD-4.0.0 | 5.47324E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19525E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6293 | likely_pathogenic | 0.7713 | pathogenic | -1.373 | Destabilizing | 0.851 | D | 0.563 | neutral | None | None | None | None | I |
Y/C | 0.1548 | likely_benign | 0.2708 | benign | -0.535 | Destabilizing | 0.026 | N | 0.305 | neutral | N | 0.483188084 | None | None | I |
Y/D | 0.6526 | likely_pathogenic | 0.7594 | pathogenic | -0.003 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | N | 0.468237274 | None | None | I |
Y/E | 0.8164 | likely_pathogenic | 0.8812 | pathogenic | 0.053 | Stabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | I |
Y/F | 0.1109 | likely_benign | 0.1297 | benign | -0.493 | Destabilizing | 0.026 | N | 0.226 | neutral | N | 0.475203319 | None | None | I |
Y/G | 0.5311 | ambiguous | 0.6974 | pathogenic | -1.63 | Destabilizing | 0.988 | D | 0.583 | neutral | None | None | None | None | I |
Y/H | 0.3307 | likely_benign | 0.4183 | ambiguous | -0.204 | Destabilizing | 0.995 | D | 0.541 | neutral | N | 0.482494651 | None | None | I |
Y/I | 0.6042 | likely_pathogenic | 0.7248 | pathogenic | -0.638 | Destabilizing | 0.952 | D | 0.558 | neutral | None | None | None | None | I |
Y/K | 0.7883 | likely_pathogenic | 0.85 | pathogenic | -0.592 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | I |
Y/L | 0.5334 | ambiguous | 0.6366 | pathogenic | -0.638 | Destabilizing | 0.851 | D | 0.549 | neutral | None | None | None | None | I |
Y/M | 0.7299 | likely_pathogenic | 0.8179 | pathogenic | -0.617 | Destabilizing | 0.997 | D | 0.62 | neutral | None | None | None | None | I |
Y/N | 0.3863 | ambiguous | 0.5245 | ambiguous | -0.992 | Destabilizing | 0.995 | D | 0.669 | neutral | N | 0.455750767 | None | None | I |
Y/P | 0.8704 | likely_pathogenic | 0.9058 | pathogenic | -0.872 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/Q | 0.6563 | likely_pathogenic | 0.7644 | pathogenic | -0.857 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | I |
Y/R | 0.576 | likely_pathogenic | 0.6705 | pathogenic | -0.331 | Destabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | I |
Y/S | 0.3323 | likely_benign | 0.4935 | ambiguous | -1.419 | Destabilizing | 0.968 | D | 0.555 | neutral | N | 0.413690714 | None | None | I |
Y/T | 0.5922 | likely_pathogenic | 0.7566 | pathogenic | -1.266 | Destabilizing | 0.976 | D | 0.567 | neutral | None | None | None | None | I |
Y/V | 0.4475 | ambiguous | 0.5814 | pathogenic | -0.872 | Destabilizing | 0.919 | D | 0.571 | neutral | None | None | None | None | I |
Y/W | 0.5079 | ambiguous | 0.544 | ambiguous | -0.315 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.