Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3428 | 10507;10508;10509 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
N2AB | 3428 | 10507;10508;10509 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
N2A | 3428 | 10507;10508;10509 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
N2B | 3382 | 10369;10370;10371 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
Novex-1 | 3382 | 10369;10370;10371 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
Novex-2 | 3382 | 10369;10370;10371 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
Novex-3 | 3428 | 10507;10508;10509 | chr2:178759005;178759004;178759003 | chr2:179623732;179623731;179623730 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.994 | N | 0.707 | 0.41 | 0.655434838176 | gnomAD-4.0.0 | 4.80131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25003E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0896 | likely_benign | 0.0979 | benign | -0.711 | Destabilizing | 0.835 | D | 0.514 | neutral | N | 0.504414832 | None | None | N |
T/C | 0.5619 | ambiguous | 0.551 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/D | 0.4695 | ambiguous | 0.5185 | ambiguous | -0.187 | Destabilizing | 0.97 | D | 0.667 | neutral | None | None | None | None | N |
T/E | 0.2905 | likely_benign | 0.3443 | ambiguous | -0.25 | Destabilizing | 0.97 | D | 0.661 | neutral | None | None | None | None | N |
T/F | 0.2998 | likely_benign | 0.2974 | benign | -1.16 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
T/G | 0.3372 | likely_benign | 0.3735 | ambiguous | -0.867 | Destabilizing | 0.97 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/H | 0.2624 | likely_benign | 0.2859 | benign | -1.28 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
T/I | 0.198 | likely_benign | 0.2242 | benign | -0.404 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | N | 0.514569191 | None | None | N |
T/K | 0.1717 | likely_benign | 0.1997 | benign | -0.494 | Destabilizing | 0.961 | D | 0.663 | neutral | N | 0.494374704 | None | None | N |
T/L | 0.1573 | likely_benign | 0.1635 | benign | -0.404 | Destabilizing | 0.985 | D | 0.63 | neutral | None | None | None | None | N |
T/M | 0.114 | likely_benign | 0.1105 | benign | 0.088 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/N | 0.182 | likely_benign | 0.1981 | benign | -0.282 | Destabilizing | 0.97 | D | 0.557 | neutral | None | None | None | None | N |
T/P | 0.2816 | likely_benign | 0.3574 | ambiguous | -0.478 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | N | 0.506995886 | None | None | N |
T/Q | 0.2041 | likely_benign | 0.2408 | benign | -0.614 | Destabilizing | 0.996 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/R | 0.1362 | likely_benign | 0.1497 | benign | -0.187 | Destabilizing | 0.994 | D | 0.729 | prob.delet. | N | 0.508308856 | None | None | N |
T/S | 0.1148 | likely_benign | 0.1149 | benign | -0.525 | Destabilizing | 0.287 | N | 0.261 | neutral | N | 0.372714814 | None | None | N |
T/V | 0.1516 | likely_benign | 0.1624 | benign | -0.478 | Destabilizing | 0.985 | D | 0.505 | neutral | None | None | None | None | N |
T/W | 0.6889 | likely_pathogenic | 0.7035 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
T/Y | 0.376 | ambiguous | 0.3899 | ambiguous | -0.819 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.