Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34284 | 103075;103076;103077 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
N2AB | 32643 | 98152;98153;98154 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
N2A | 31716 | 95371;95372;95373 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
N2B | 25219 | 75880;75881;75882 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
Novex-1 | 25344 | 76255;76256;76257 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
Novex-2 | 25411 | 76456;76457;76458 | chr2:178533765;178533764;178533763 | chr2:179398492;179398491;179398490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs879025670 | None | 0.811 | N | 0.521 | 0.424 | None | gnomAD-4.0.0 | 1.59098E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85771E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8659 | likely_pathogenic | 0.8799 | pathogenic | 0.49 | Stabilizing | 0.919 | D | 0.613 | neutral | None | None | None | None | I |
H/C | 0.6514 | likely_pathogenic | 0.6544 | pathogenic | 0.608 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
H/D | 0.8201 | likely_pathogenic | 0.8299 | pathogenic | -0.346 | Destabilizing | 0.896 | D | 0.586 | neutral | N | 0.452633104 | None | None | I |
H/E | 0.8894 | likely_pathogenic | 0.8965 | pathogenic | -0.344 | Destabilizing | 0.851 | D | 0.495 | neutral | None | None | None | None | I |
H/F | 0.6058 | likely_pathogenic | 0.6558 | pathogenic | 0.979 | Stabilizing | 0.996 | D | 0.558 | neutral | None | None | None | None | I |
H/G | 0.9439 | likely_pathogenic | 0.9531 | pathogenic | 0.28 | Stabilizing | 0.919 | D | 0.625 | neutral | None | None | None | None | I |
H/I | 0.8335 | likely_pathogenic | 0.8489 | pathogenic | 1.003 | Stabilizing | 0.988 | D | 0.673 | neutral | None | None | None | None | I |
H/K | 0.8498 | likely_pathogenic | 0.8797 | pathogenic | 0.354 | Stabilizing | 0.851 | D | 0.613 | neutral | None | None | None | None | I |
H/L | 0.5061 | ambiguous | 0.5355 | ambiguous | 1.003 | Stabilizing | 0.968 | D | 0.591 | neutral | N | 0.491556851 | None | None | I |
H/M | 0.877 | likely_pathogenic | 0.8902 | pathogenic | 0.631 | Stabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | I |
H/N | 0.4655 | ambiguous | 0.5271 | ambiguous | 0.197 | Stabilizing | 0.896 | D | 0.557 | neutral | N | 0.467890558 | None | None | I |
H/P | 0.7619 | likely_pathogenic | 0.6959 | pathogenic | 0.854 | Stabilizing | 0.984 | D | 0.659 | neutral | N | 0.484794184 | None | None | I |
H/Q | 0.7689 | likely_pathogenic | 0.8197 | pathogenic | 0.256 | Stabilizing | 0.211 | N | 0.313 | neutral | N | 0.494903801 | None | None | I |
H/R | 0.6474 | likely_pathogenic | 0.7114 | pathogenic | -0.147 | Destabilizing | 0.811 | D | 0.521 | neutral | N | 0.490402058 | None | None | I |
H/S | 0.7077 | likely_pathogenic | 0.7427 | pathogenic | 0.393 | Stabilizing | 0.919 | D | 0.612 | neutral | None | None | None | None | I |
H/T | 0.8621 | likely_pathogenic | 0.8844 | pathogenic | 0.482 | Stabilizing | 0.976 | D | 0.58 | neutral | None | None | None | None | I |
H/V | 0.8324 | likely_pathogenic | 0.8514 | pathogenic | 0.854 | Stabilizing | 0.988 | D | 0.649 | neutral | None | None | None | None | I |
H/W | 0.7114 | likely_pathogenic | 0.706 | pathogenic | 0.839 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
H/Y | 0.256 | likely_benign | 0.2988 | benign | 1.102 | Stabilizing | 0.982 | D | 0.505 | neutral | N | 0.474664601 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.