Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34290 | 103093;103094;103095 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
N2AB | 32649 | 98170;98171;98172 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
N2A | 31722 | 95389;95390;95391 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
N2B | 25225 | 75898;75899;75900 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
Novex-1 | 25350 | 76273;76274;76275 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
Novex-2 | 25417 | 76474;76475;76476 | chr2:178533747;178533746;178533745 | chr2:179398474;179398473;179398472 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.99 | D | 0.673 | 0.634 | 0.55350970329 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
T/R | None | None | 0.942 | D | 0.673 | 0.387 | 0.490419987736 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1297 | likely_benign | 0.1529 | benign | -0.815 | Destabilizing | 0.656 | D | 0.542 | neutral | N | 0.503418644 | None | None | N |
T/C | 0.4879 | ambiguous | 0.576 | pathogenic | -0.413 | Destabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
T/D | 0.5353 | ambiguous | 0.5851 | pathogenic | -0.613 | Destabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | N |
T/E | 0.3788 | ambiguous | 0.4185 | ambiguous | -0.467 | Destabilizing | 0.978 | D | 0.633 | neutral | None | None | None | None | N |
T/F | 0.2501 | likely_benign | 0.3123 | benign | -0.565 | Destabilizing | 0.956 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/G | 0.4898 | ambiguous | 0.5735 | pathogenic | -1.193 | Destabilizing | 0.978 | D | 0.668 | neutral | None | None | None | None | N |
T/H | 0.3124 | likely_benign | 0.3656 | ambiguous | -1.279 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/I | 0.1273 | likely_benign | 0.1428 | benign | 0.153 | Stabilizing | 0.058 | N | 0.357 | neutral | D | 0.53079003 | None | None | N |
T/K | 0.3166 | likely_benign | 0.3867 | ambiguous | -0.436 | Destabilizing | 0.942 | D | 0.633 | neutral | N | 0.514607069 | None | None | N |
T/L | 0.1191 | likely_benign | 0.1413 | benign | 0.153 | Stabilizing | 0.303 | N | 0.518 | neutral | None | None | None | None | N |
T/M | 0.0949 | likely_benign | 0.1137 | benign | 0.117 | Stabilizing | 0.559 | D | 0.501 | neutral | None | None | None | None | N |
T/N | 0.2065 | likely_benign | 0.2558 | benign | -0.868 | Destabilizing | 0.978 | D | 0.535 | neutral | None | None | None | None | N |
T/P | 0.8335 | likely_pathogenic | 0.8814 | pathogenic | -0.137 | Destabilizing | 0.99 | D | 0.673 | neutral | D | 0.544693264 | None | None | N |
T/Q | 0.2845 | likely_benign | 0.3323 | benign | -0.706 | Destabilizing | 0.978 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/R | 0.2563 | likely_benign | 0.3317 | benign | -0.525 | Destabilizing | 0.942 | D | 0.673 | neutral | D | 0.533251545 | None | None | N |
T/S | 0.1558 | likely_benign | 0.184 | benign | -1.139 | Destabilizing | 0.822 | D | 0.533 | neutral | N | 0.51812459 | None | None | N |
T/V | 0.1295 | likely_benign | 0.145 | benign | -0.137 | Destabilizing | 0.559 | D | 0.484 | neutral | None | None | None | None | N |
T/W | 0.6365 | likely_pathogenic | 0.6964 | pathogenic | -0.702 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/Y | 0.324 | likely_benign | 0.3909 | ambiguous | -0.339 | Destabilizing | 0.978 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.