Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34292 | 103099;103100;103101 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
N2AB | 32651 | 98176;98177;98178 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
N2A | 31724 | 95395;95396;95397 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
N2B | 25227 | 75904;75905;75906 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
Novex-1 | 25352 | 76279;76280;76281 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
Novex-2 | 25419 | 76480;76481;76482 | chr2:178533741;178533740;178533739 | chr2:179398468;179398467;179398466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1690203448 | None | 0.989 | N | 0.548 | 0.267 | 0.331365685468 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs1690203448 | None | 0.989 | N | 0.548 | 0.267 | 0.331365685468 | gnomAD-4.0.0 | 3.09828E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.3902E-06 | 0 | 1.60102E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8616 | likely_pathogenic | 0.8916 | pathogenic | -2.579 | Highly Destabilizing | 0.842 | D | 0.535 | neutral | None | None | None | None | N |
Y/C | 0.2723 | likely_benign | 0.3621 | ambiguous | -1.156 | Destabilizing | 0.997 | D | 0.606 | neutral | N | 0.470921262 | None | None | N |
Y/D | 0.849 | likely_pathogenic | 0.8773 | pathogenic | -1.159 | Destabilizing | 0.989 | D | 0.625 | neutral | N | 0.462527471 | None | None | N |
Y/E | 0.8519 | likely_pathogenic | 0.8607 | pathogenic | -1.053 | Destabilizing | 0.991 | D | 0.613 | neutral | None | None | None | None | N |
Y/F | 0.0835 | likely_benign | 0.0825 | benign | -1.086 | Destabilizing | 0.012 | N | 0.229 | neutral | N | 0.428933367 | None | None | N |
Y/G | 0.8409 | likely_pathogenic | 0.8721 | pathogenic | -2.908 | Highly Destabilizing | 0.974 | D | 0.617 | neutral | None | None | None | None | N |
Y/H | 0.2611 | likely_benign | 0.2838 | benign | -1.191 | Destabilizing | 0.989 | D | 0.548 | neutral | N | 0.504721992 | None | None | N |
Y/I | 0.6353 | likely_pathogenic | 0.6665 | pathogenic | -1.56 | Destabilizing | 0.525 | D | 0.481 | neutral | None | None | None | None | N |
Y/K | 0.7711 | likely_pathogenic | 0.7854 | pathogenic | -1.223 | Destabilizing | 0.974 | D | 0.608 | neutral | None | None | None | None | N |
Y/L | 0.4116 | ambiguous | 0.4556 | ambiguous | -1.56 | Destabilizing | 0.002 | N | 0.303 | neutral | None | None | None | None | N |
Y/M | 0.5929 | likely_pathogenic | 0.6332 | pathogenic | -1.215 | Destabilizing | 0.949 | D | 0.581 | neutral | None | None | None | None | N |
Y/N | 0.493 | ambiguous | 0.5389 | ambiguous | -1.504 | Destabilizing | 0.989 | D | 0.612 | neutral | N | 0.442448207 | None | None | N |
Y/P | 0.9977 | likely_pathogenic | 0.9985 | pathogenic | -1.898 | Destabilizing | 0.991 | D | 0.635 | neutral | None | None | None | None | N |
Y/Q | 0.6983 | likely_pathogenic | 0.7328 | pathogenic | -1.47 | Destabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | N |
Y/R | 0.6514 | likely_pathogenic | 0.6706 | pathogenic | -0.73 | Destabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
Y/S | 0.589 | likely_pathogenic | 0.6397 | pathogenic | -2.13 | Highly Destabilizing | 0.891 | D | 0.605 | neutral | N | 0.497390588 | None | None | N |
Y/T | 0.7292 | likely_pathogenic | 0.7736 | pathogenic | -1.93 | Destabilizing | 0.915 | D | 0.581 | neutral | None | None | None | None | N |
Y/V | 0.5855 | likely_pathogenic | 0.6397 | pathogenic | -1.898 | Destabilizing | 0.525 | D | 0.487 | neutral | None | None | None | None | N |
Y/W | 0.4589 | ambiguous | 0.4454 | ambiguous | -0.52 | Destabilizing | 0.991 | D | 0.548 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.