Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34297 | 103114;103115;103116 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
N2AB | 32656 | 98191;98192;98193 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
N2A | 31729 | 95410;95411;95412 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
N2B | 25232 | 75919;75920;75921 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
Novex-1 | 25357 | 76294;76295;76296 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
Novex-2 | 25424 | 76495;76496;76497 | chr2:178533726;178533725;178533724 | chr2:179398453;179398452;179398451 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1019464699 | 0.058 | 0.982 | N | 0.672 | 0.347 | 0.29132392195 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
K/N | rs1019464699 | 0.058 | 0.982 | N | 0.672 | 0.347 | 0.29132392195 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1019464699 | 0.058 | 0.982 | N | 0.672 | 0.347 | 0.29132392195 | gnomAD-4.0.0 | 2.02984E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40981E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.468 | ambiguous | 0.4841 | ambiguous | -0.383 | Destabilizing | 0.953 | D | 0.599 | neutral | None | None | None | None | N |
K/C | 0.7672 | likely_pathogenic | 0.82 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/D | 0.8088 | likely_pathogenic | 0.8464 | pathogenic | 0.012 | Stabilizing | 0.993 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/E | 0.2519 | likely_benign | 0.2945 | benign | 0.117 | Stabilizing | 0.939 | D | 0.601 | neutral | N | 0.429334957 | None | None | N |
K/F | 0.8668 | likely_pathogenic | 0.9013 | pathogenic | -0.067 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/G | 0.7474 | likely_pathogenic | 0.8022 | pathogenic | -0.719 | Destabilizing | 0.993 | D | 0.577 | neutral | None | None | None | None | N |
K/H | 0.4989 | ambiguous | 0.5427 | ambiguous | -0.913 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/I | 0.369 | ambiguous | 0.401 | ambiguous | 0.474 | Stabilizing | 0.991 | D | 0.732 | prob.delet. | N | 0.497293532 | None | None | N |
K/L | 0.3967 | ambiguous | 0.4234 | ambiguous | 0.474 | Stabilizing | 0.986 | D | 0.577 | neutral | None | None | None | None | N |
K/M | 0.2514 | likely_benign | 0.2815 | benign | 0.095 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/N | 0.625 | likely_pathogenic | 0.6742 | pathogenic | -0.291 | Destabilizing | 0.982 | D | 0.672 | neutral | N | 0.518783525 | None | None | N |
K/P | 0.5845 | likely_pathogenic | 0.6136 | pathogenic | 0.218 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Q | 0.1937 | likely_benign | 0.2136 | benign | -0.291 | Destabilizing | 0.982 | D | 0.675 | prob.neutral | N | 0.484689594 | None | None | N |
K/R | 0.1009 | likely_benign | 0.1131 | benign | -0.435 | Destabilizing | 0.046 | N | 0.279 | neutral | N | 0.499755047 | None | None | N |
K/S | 0.6647 | likely_pathogenic | 0.7025 | pathogenic | -0.838 | Destabilizing | 0.953 | D | 0.633 | neutral | None | None | None | None | N |
K/T | 0.3068 | likely_benign | 0.3171 | benign | -0.539 | Destabilizing | 0.991 | D | 0.643 | neutral | N | 0.51322299 | None | None | N |
K/V | 0.3673 | ambiguous | 0.3925 | ambiguous | 0.218 | Stabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/W | 0.8505 | likely_pathogenic | 0.8933 | pathogenic | -0.025 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/Y | 0.7569 | likely_pathogenic | 0.8075 | pathogenic | 0.25 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.