Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3431 | 10516;10517;10518 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
N2AB | 3431 | 10516;10517;10518 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
N2A | 3431 | 10516;10517;10518 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
N2B | 3385 | 10378;10379;10380 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
Novex-1 | 3385 | 10378;10379;10380 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
Novex-2 | 3385 | 10378;10379;10380 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
Novex-3 | 3431 | 10516;10517;10518 | chr2:178758996;178758995;178758994 | chr2:179623723;179623722;179623721 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.895 | 0.879 | 0.939559954431 | gnomAD-4.0.0 | 1.59082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02261E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9366 | likely_pathogenic | 0.9563 | pathogenic | -2.661 | Highly Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
L/C | 0.9098 | likely_pathogenic | 0.926 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/D | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/E | 0.9933 | likely_pathogenic | 0.9951 | pathogenic | -2.707 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.5879 | likely_pathogenic | 0.6521 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/G | 0.9874 | likely_pathogenic | 0.9905 | pathogenic | -3.222 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/H | 0.9763 | likely_pathogenic | 0.9774 | pathogenic | -2.655 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.1682 | likely_benign | 0.213 | benign | -1.026 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
L/K | 0.9838 | likely_pathogenic | 0.9887 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/M | 0.4 | ambiguous | 0.4639 | ambiguous | -1.127 | Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.723344648 | None | None | N |
L/N | 0.9926 | likely_pathogenic | 0.9948 | pathogenic | -2.303 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9951 | likely_pathogenic | 0.996 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.802833583 | None | None | N |
L/Q | 0.9694 | likely_pathogenic | 0.9765 | pathogenic | -2.149 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | D | 0.802833583 | None | None | N |
L/R | 0.9595 | likely_pathogenic | 0.97 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.802833583 | None | None | N |
L/S | 0.9896 | likely_pathogenic | 0.9933 | pathogenic | -3.042 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/T | 0.9483 | likely_pathogenic | 0.9696 | pathogenic | -2.65 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/V | 0.217 | likely_benign | 0.2926 | benign | -1.554 | Destabilizing | 0.999 | D | 0.602 | neutral | D | 0.613009359 | None | None | N |
L/W | 0.9558 | likely_pathogenic | 0.961 | pathogenic | -2.0 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/Y | 0.9598 | likely_pathogenic | 0.9666 | pathogenic | -1.739 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.