Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34310 | 103153;103154;103155 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
N2AB | 32669 | 98230;98231;98232 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
N2A | 31742 | 95449;95450;95451 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
N2B | 25245 | 75958;75959;75960 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
Novex-1 | 25370 | 76333;76334;76335 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
Novex-2 | 25437 | 76534;76535;76536 | chr2:178533687;178533686;178533685 | chr2:179398414;179398413;179398412 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs768930172 | -0.223 | 0.92 | N | 0.266 | 0.254 | 0.273938319068 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/K | rs768930172 | -0.223 | 0.92 | N | 0.266 | 0.254 | 0.273938319068 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs768930172 | -0.223 | 0.92 | N | 0.266 | 0.254 | 0.273938319068 | gnomAD-4.0.0 | 2.4786E-06 | None | None | None | None | N | None | 4.00459E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.4755E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2042 | likely_benign | 0.1865 | benign | -0.37 | Destabilizing | 0.704 | D | 0.323 | neutral | N | 0.486593749 | None | None | N |
E/C | 0.8503 | likely_pathogenic | 0.8291 | pathogenic | 0.134 | Stabilizing | 0.999 | D | 0.418 | neutral | None | None | None | None | N |
E/D | 0.2592 | likely_benign | 0.2425 | benign | -0.379 | Destabilizing | 0.826 | D | 0.28 | neutral | N | 0.461274017 | None | None | N |
E/F | 0.7335 | likely_pathogenic | 0.709 | pathogenic | -0.359 | Destabilizing | 0.991 | D | 0.445 | neutral | None | None | None | None | N |
E/G | 0.3424 | ambiguous | 0.3103 | benign | -0.583 | Destabilizing | 0.92 | D | 0.339 | neutral | N | 0.47784098 | None | None | N |
E/H | 0.4575 | ambiguous | 0.4203 | ambiguous | -0.394 | Destabilizing | 0.997 | D | 0.36 | neutral | None | None | None | None | N |
E/I | 0.2915 | likely_benign | 0.2888 | benign | 0.159 | Stabilizing | 0.884 | D | 0.372 | neutral | None | None | None | None | N |
E/K | 0.1992 | likely_benign | 0.1805 | benign | 0.365 | Stabilizing | 0.92 | D | 0.266 | neutral | N | 0.399993485 | None | None | N |
E/L | 0.4133 | ambiguous | 0.399 | ambiguous | 0.159 | Stabilizing | 0.759 | D | 0.369 | neutral | None | None | None | None | N |
E/M | 0.4714 | ambiguous | 0.467 | ambiguous | 0.397 | Stabilizing | 0.991 | D | 0.402 | neutral | None | None | None | None | N |
E/N | 0.4251 | ambiguous | 0.3832 | ambiguous | 0.104 | Stabilizing | 0.939 | D | 0.292 | neutral | None | None | None | None | N |
E/P | 0.9719 | likely_pathogenic | 0.9653 | pathogenic | 0.003 | Stabilizing | 0.991 | D | 0.359 | neutral | None | None | None | None | N |
E/Q | 0.1426 | likely_benign | 0.1305 | benign | 0.13 | Stabilizing | 0.959 | D | 0.321 | neutral | N | 0.457137633 | None | None | N |
E/R | 0.3107 | likely_benign | 0.2721 | benign | 0.421 | Stabilizing | 0.991 | D | 0.32 | neutral | None | None | None | None | N |
E/S | 0.2531 | likely_benign | 0.2341 | benign | -0.069 | Destabilizing | 0.373 | N | 0.123 | neutral | None | None | None | None | N |
E/T | 0.2205 | likely_benign | 0.2064 | benign | 0.103 | Stabilizing | 0.079 | N | 0.151 | neutral | None | None | None | None | N |
E/V | 0.2017 | likely_benign | 0.1994 | benign | 0.003 | Stabilizing | 0.134 | N | 0.248 | neutral | N | 0.445632561 | None | None | N |
E/W | 0.9117 | likely_pathogenic | 0.8955 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | N |
E/Y | 0.668 | likely_pathogenic | 0.6368 | pathogenic | -0.117 | Destabilizing | 0.997 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.