Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34330 | 103213;103214;103215 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
N2AB | 32689 | 98290;98291;98292 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
N2A | 31762 | 95509;95510;95511 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
N2B | 25265 | 76018;76019;76020 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
Novex-1 | 25390 | 76393;76394;76395 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
Novex-2 | 25457 | 76594;76595;76596 | chr2:178533627;178533626;178533625 | chr2:179398354;179398353;179398352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.969 | N | 0.575 | 0.361 | 0.421427970867 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.275 | likely_benign | 0.3405 | ambiguous | -0.829 | Destabilizing | 0.939 | D | 0.623 | neutral | D | 0.531019317 | None | None | N |
E/C | 0.943 | likely_pathogenic | 0.96 | pathogenic | -0.268 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.24 | likely_benign | 0.2859 | benign | -0.999 | Destabilizing | 0.99 | D | 0.513 | neutral | N | 0.487631794 | None | None | N |
E/F | 0.8702 | likely_pathogenic | 0.9094 | pathogenic | -0.729 | Destabilizing | 0.986 | D | 0.794 | deleterious | None | None | None | None | N |
E/G | 0.4981 | ambiguous | 0.5897 | pathogenic | -1.127 | Destabilizing | 0.997 | D | 0.743 | deleterious | D | 0.535223063 | None | None | N |
E/H | 0.7709 | likely_pathogenic | 0.8343 | pathogenic | -1.009 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.4196 | ambiguous | 0.4835 | ambiguous | -0.039 | Destabilizing | 0.128 | N | 0.493 | neutral | None | None | None | None | N |
E/K | 0.3812 | ambiguous | 0.473 | ambiguous | -0.326 | Destabilizing | 0.969 | D | 0.575 | neutral | N | 0.498040106 | None | None | N |
E/L | 0.555 | ambiguous | 0.6165 | pathogenic | -0.039 | Destabilizing | 0.91 | D | 0.66 | neutral | None | None | None | None | N |
E/M | 0.6034 | likely_pathogenic | 0.662 | pathogenic | 0.457 | Stabilizing | 0.996 | D | 0.776 | deleterious | None | None | None | None | N |
E/N | 0.4554 | ambiguous | 0.5529 | ambiguous | -0.656 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/P | 0.8061 | likely_pathogenic | 0.8246 | pathogenic | -0.282 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
E/Q | 0.3101 | likely_benign | 0.3684 | ambiguous | -0.603 | Destabilizing | 0.997 | D | 0.645 | neutral | N | 0.520879681 | None | None | N |
E/R | 0.5939 | likely_pathogenic | 0.6715 | pathogenic | -0.23 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/S | 0.3591 | ambiguous | 0.447 | ambiguous | -0.934 | Destabilizing | 0.976 | D | 0.591 | neutral | None | None | None | None | N |
E/T | 0.2864 | likely_benign | 0.3538 | ambiguous | -0.688 | Destabilizing | 0.986 | D | 0.75 | deleterious | None | None | None | None | N |
E/V | 0.266 | likely_benign | 0.3292 | benign | -0.282 | Destabilizing | 0.885 | D | 0.625 | neutral | N | 0.481804005 | None | None | N |
E/W | 0.9605 | likely_pathogenic | 0.9746 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.8226 | likely_pathogenic | 0.8763 | pathogenic | -0.483 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.