Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34336 | 103231;103232;103233 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
N2AB | 32695 | 98308;98309;98310 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
N2A | 31768 | 95527;95528;95529 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
N2B | 25271 | 76036;76037;76038 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
Novex-1 | 25396 | 76411;76412;76413 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
Novex-2 | 25463 | 76612;76613;76614 | chr2:178533609;178533608;178533607 | chr2:179398336;179398335;179398334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.127 | 0.058 | 0.162503812791 | gnomAD-4.0.0 | 1.36832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79882E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4589 | ambiguous | 0.5127 | ambiguous | -0.383 | Destabilizing | 0.055 | N | 0.438 | neutral | None | None | None | None | I |
R/C | 0.2193 | likely_benign | 0.223 | benign | -0.29 | Destabilizing | 0.958 | D | 0.458 | neutral | None | None | None | None | I |
R/D | 0.8239 | likely_pathogenic | 0.8315 | pathogenic | 0.03 | Stabilizing | 0.22 | N | 0.522 | neutral | None | None | None | None | I |
R/E | 0.3838 | ambiguous | 0.4271 | ambiguous | 0.135 | Stabilizing | 0.055 | N | 0.395 | neutral | None | None | None | None | I |
R/F | 0.6783 | likely_pathogenic | 0.7299 | pathogenic | -0.318 | Destabilizing | 0.667 | D | 0.481 | neutral | None | None | None | None | I |
R/G | 0.3728 | ambiguous | 0.4238 | ambiguous | -0.673 | Destabilizing | 0.175 | N | 0.483 | neutral | N | 0.477512906 | None | None | I |
R/H | 0.1249 | likely_benign | 0.1174 | benign | -1.103 | Destabilizing | 0.001 | N | 0.157 | neutral | None | None | None | None | I |
R/I | 0.3789 | ambiguous | 0.4232 | ambiguous | 0.381 | Stabilizing | 0.124 | N | 0.548 | neutral | None | None | None | None | I |
R/K | 0.077 | likely_benign | 0.0954 | benign | -0.421 | Destabilizing | None | N | 0.127 | neutral | N | 0.403975152 | None | None | I |
R/L | 0.372 | ambiguous | 0.4134 | ambiguous | 0.381 | Stabilizing | 0.055 | N | 0.485 | neutral | None | None | None | None | I |
R/M | 0.3188 | likely_benign | 0.4124 | ambiguous | 0.028 | Stabilizing | 0.602 | D | 0.478 | neutral | N | 0.495367948 | None | None | I |
R/N | 0.6287 | likely_pathogenic | 0.6662 | pathogenic | 0.082 | Stabilizing | 0.22 | N | 0.4 | neutral | None | None | None | None | I |
R/P | 0.9777 | likely_pathogenic | 0.9831 | pathogenic | 0.148 | Stabilizing | 0.364 | N | 0.488 | neutral | None | None | None | None | I |
R/Q | 0.1064 | likely_benign | 0.1137 | benign | -0.071 | Destabilizing | 0.011 | N | 0.201 | neutral | None | None | None | None | I |
R/S | 0.4939 | ambiguous | 0.5233 | ambiguous | -0.529 | Destabilizing | 0.042 | N | 0.449 | neutral | N | 0.44103203 | None | None | I |
R/T | 0.238 | likely_benign | 0.2716 | benign | -0.253 | Destabilizing | 0.175 | N | 0.463 | neutral | N | 0.431217682 | None | None | I |
R/V | 0.3972 | ambiguous | 0.459 | ambiguous | 0.148 | Stabilizing | 0.001 | N | 0.31 | neutral | None | None | None | None | I |
R/W | 0.2694 | likely_benign | 0.2796 | benign | -0.106 | Destabilizing | 0.946 | D | 0.469 | neutral | D | 0.52732565 | None | None | I |
R/Y | 0.5452 | ambiguous | 0.5693 | pathogenic | 0.23 | Stabilizing | 0.497 | N | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.