Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34338 | 103237;103238;103239 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
N2AB | 32697 | 98314;98315;98316 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
N2A | 31770 | 95533;95534;95535 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
N2B | 25273 | 76042;76043;76044 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
Novex-1 | 25398 | 76417;76418;76419 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
Novex-2 | 25465 | 76618;76619;76620 | chr2:178533603;178533602;178533601 | chr2:179398330;179398329;179398328 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.994 | N | 0.587 | 0.427 | 0.377799810692 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85767E-06 | 0 | 0 |
K/T | None | None | 0.997 | N | 0.519 | 0.405 | 0.440498838766 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5877 | likely_pathogenic | 0.5933 | pathogenic | -0.139 | Destabilizing | 0.983 | D | 0.519 | neutral | None | None | None | None | I |
K/C | 0.8873 | likely_pathogenic | 0.9101 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/D | 0.8239 | likely_pathogenic | 0.83 | pathogenic | -0.221 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | I |
K/E | 0.4302 | ambiguous | 0.4481 | ambiguous | -0.194 | Destabilizing | 0.978 | D | 0.523 | neutral | N | 0.471392223 | None | None | I |
K/F | 0.954 | likely_pathogenic | 0.9628 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
K/G | 0.7897 | likely_pathogenic | 0.8088 | pathogenic | -0.327 | Destabilizing | 0.998 | D | 0.464 | neutral | None | None | None | None | I |
K/H | 0.5927 | likely_pathogenic | 0.6274 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.554 | neutral | None | None | None | None | I |
K/I | 0.5695 | likely_pathogenic | 0.6211 | pathogenic | 0.285 | Stabilizing | 0.999 | D | 0.634 | neutral | N | 0.499736404 | None | None | I |
K/L | 0.6477 | likely_pathogenic | 0.6793 | pathogenic | 0.285 | Stabilizing | 0.995 | D | 0.464 | neutral | None | None | None | None | I |
K/M | 0.4994 | ambiguous | 0.5643 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.562 | neutral | None | None | None | None | I |
K/N | 0.7266 | likely_pathogenic | 0.7345 | pathogenic | -0.126 | Destabilizing | 0.997 | D | 0.579 | neutral | N | 0.510529401 | None | None | I |
K/P | 0.6972 | likely_pathogenic | 0.7081 | pathogenic | 0.169 | Stabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | I |
K/Q | 0.3044 | likely_benign | 0.3244 | benign | -0.198 | Destabilizing | 0.994 | D | 0.587 | neutral | N | 0.501467201 | None | None | I |
K/R | 0.0997 | likely_benign | 0.1101 | benign | -0.158 | Destabilizing | 0.121 | N | 0.417 | neutral | N | 0.464757039 | None | None | I |
K/S | 0.7234 | likely_pathogenic | 0.7229 | pathogenic | -0.502 | Destabilizing | 0.992 | D | 0.533 | neutral | None | None | None | None | I |
K/T | 0.3832 | ambiguous | 0.3888 | ambiguous | -0.327 | Destabilizing | 0.997 | D | 0.519 | neutral | N | 0.505507583 | None | None | I |
K/V | 0.5748 | likely_pathogenic | 0.6193 | pathogenic | 0.169 | Stabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | I |
K/W | 0.9303 | likely_pathogenic | 0.954 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
K/Y | 0.8739 | likely_pathogenic | 0.9003 | pathogenic | -0.104 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.