Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34340 | 103243;103244;103245 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
N2AB | 32699 | 98320;98321;98322 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
N2A | 31772 | 95539;95540;95541 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
N2B | 25275 | 76048;76049;76050 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
Novex-1 | 25400 | 76423;76424;76425 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
Novex-2 | 25467 | 76624;76625;76626 | chr2:178533597;178533596;178533595 | chr2:179398324;179398323;179398322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1211065675 | -0.39 | 1.0 | D | 0.756 | 0.813 | 0.518312163451 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
G/A | rs1211065675 | -0.39 | 1.0 | D | 0.756 | 0.813 | 0.518312163451 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9303 | likely_pathogenic | 0.9026 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.607104778 | None | None | I |
G/C | 0.9828 | likely_pathogenic | 0.9784 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.645694113 | None | None | I |
G/D | 0.9882 | likely_pathogenic | 0.9784 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.606701169 | None | None | I |
G/E | 0.9925 | likely_pathogenic | 0.9873 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/F | 0.9972 | likely_pathogenic | 0.9969 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
G/H | 0.9954 | likely_pathogenic | 0.9937 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/I | 0.9973 | likely_pathogenic | 0.9963 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/K | 0.9927 | likely_pathogenic | 0.9894 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/L | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/M | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
G/N | 0.9922 | likely_pathogenic | 0.9891 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
G/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/Q | 0.9895 | likely_pathogenic | 0.9849 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/R | 0.9737 | likely_pathogenic | 0.9658 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.607306582 | None | None | I |
G/S | 0.8895 | likely_pathogenic | 0.8622 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.598605767 | None | None | I |
G/T | 0.9892 | likely_pathogenic | 0.9827 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/V | 0.9943 | likely_pathogenic | 0.9925 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.645290504 | None | None | I |
G/W | 0.9918 | likely_pathogenic | 0.9907 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
G/Y | 0.9957 | likely_pathogenic | 0.9952 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.