Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34341 | 103246;103247;103248 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
N2AB | 32700 | 98323;98324;98325 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
N2A | 31773 | 95542;95543;95544 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
N2B | 25276 | 76051;76052;76053 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
Novex-1 | 25401 | 76426;76427;76428 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
Novex-2 | 25468 | 76627;76628;76629 | chr2:178533594;178533593;178533592 | chr2:179398321;179398320;179398319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1330415230 | -0.33 | 0.046 | N | 0.261 | 0.111 | 0.326881540566 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4469 | ambiguous | 0.3955 | ambiguous | -0.47 | Destabilizing | 0.885 | D | 0.634 | neutral | N | 0.491710399 | None | None | I |
E/C | 0.9698 | likely_pathogenic | 0.9675 | pathogenic | -0.072 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/D | 0.4419 | ambiguous | 0.3909 | ambiguous | -0.47 | Destabilizing | 0.046 | N | 0.261 | neutral | N | 0.488520848 | None | None | I |
E/F | 0.9521 | likely_pathogenic | 0.936 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | I |
E/G | 0.6218 | likely_pathogenic | 0.5579 | ambiguous | -0.691 | Destabilizing | 0.046 | N | 0.447 | neutral | N | 0.509031413 | None | None | I |
E/H | 0.8681 | likely_pathogenic | 0.8492 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | I |
E/I | 0.7419 | likely_pathogenic | 0.6926 | pathogenic | 0.086 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/K | 0.4126 | ambiguous | 0.369 | ambiguous | 0.232 | Stabilizing | 0.939 | D | 0.629 | neutral | N | 0.508891818 | None | None | I |
E/L | 0.8413 | likely_pathogenic | 0.8071 | pathogenic | 0.086 | Stabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/M | 0.7445 | likely_pathogenic | 0.7121 | pathogenic | 0.239 | Stabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/N | 0.6987 | likely_pathogenic | 0.637 | pathogenic | -0.092 | Destabilizing | 0.986 | D | 0.598 | neutral | None | None | None | None | I |
E/P | 0.9946 | likely_pathogenic | 0.9937 | pathogenic | -0.079 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
E/Q | 0.3146 | likely_benign | 0.2985 | benign | -0.066 | Destabilizing | 0.991 | D | 0.577 | neutral | D | 0.531443391 | None | None | I |
E/R | 0.6344 | likely_pathogenic | 0.5973 | pathogenic | 0.427 | Stabilizing | 0.993 | D | 0.63 | neutral | None | None | None | None | I |
E/S | 0.4707 | ambiguous | 0.4214 | ambiguous | -0.272 | Destabilizing | 0.953 | D | 0.611 | neutral | None | None | None | None | I |
E/T | 0.5135 | ambiguous | 0.4647 | ambiguous | -0.093 | Destabilizing | 0.993 | D | 0.592 | neutral | None | None | None | None | I |
E/V | 0.5244 | ambiguous | 0.4744 | ambiguous | -0.079 | Destabilizing | 0.991 | D | 0.672 | neutral | N | 0.492079247 | None | None | I |
E/W | 0.9838 | likely_pathogenic | 0.9806 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/Y | 0.9226 | likely_pathogenic | 0.9065 | pathogenic | -0.056 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.