Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34346 | 103261;103262;103263 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
N2AB | 32705 | 98338;98339;98340 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
N2A | 31778 | 95557;95558;95559 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
N2B | 25281 | 76066;76067;76068 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
Novex-1 | 25406 | 76441;76442;76443 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
Novex-2 | 25473 | 76642;76643;76644 | chr2:178533579;178533578;178533577 | chr2:179398306;179398305;179398304 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.955 | D | 0.651 | 0.531 | 0.470730462751 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85768E-06 | 0 | 0 |
A/V | None | None | 0.977 | D | 0.674 | 0.404 | 0.513055635523 | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88352E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9422 | likely_pathogenic | 0.9145 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
A/D | 0.9924 | likely_pathogenic | 0.9899 | pathogenic | -1.944 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
A/E | 0.9897 | likely_pathogenic | 0.9867 | pathogenic | -1.803 | Destabilizing | 0.993 | D | 0.803 | deleterious | D | 0.554776257 | None | None | N |
A/F | 0.9899 | likely_pathogenic | 0.9856 | pathogenic | -0.755 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
A/G | 0.2956 | likely_benign | 0.2836 | benign | -1.431 | Destabilizing | 0.955 | D | 0.585 | neutral | D | 0.524752279 | None | None | N |
A/H | 0.9969 | likely_pathogenic | 0.9956 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/I | 0.9873 | likely_pathogenic | 0.9773 | pathogenic | 0.153 | Stabilizing | 0.998 | D | 0.864 | deleterious | None | None | None | None | N |
A/K | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -1.194 | Destabilizing | 0.995 | D | 0.806 | deleterious | None | None | None | None | N |
A/L | 0.9469 | likely_pathogenic | 0.9249 | pathogenic | 0.153 | Stabilizing | 0.983 | D | 0.776 | deleterious | None | None | None | None | N |
A/M | 0.968 | likely_pathogenic | 0.9495 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
A/N | 0.9869 | likely_pathogenic | 0.9834 | pathogenic | -1.304 | Destabilizing | 0.995 | D | 0.864 | deleterious | None | None | None | None | N |
A/P | 0.9973 | likely_pathogenic | 0.9971 | pathogenic | -0.182 | Destabilizing | 0.997 | D | 0.868 | deleterious | D | 0.555029747 | None | None | N |
A/Q | 0.986 | likely_pathogenic | 0.9836 | pathogenic | -1.199 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
A/R | 0.9905 | likely_pathogenic | 0.9896 | pathogenic | -1.189 | Destabilizing | 0.995 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.416 | ambiguous | 0.3715 | ambiguous | -1.733 | Destabilizing | 0.568 | D | 0.384 | neutral | N | 0.504298153 | None | None | N |
A/T | 0.8268 | likely_pathogenic | 0.7414 | pathogenic | -1.468 | Destabilizing | 0.955 | D | 0.651 | neutral | D | 0.536910713 | None | None | N |
A/V | 0.9173 | likely_pathogenic | 0.8626 | pathogenic | -0.182 | Destabilizing | 0.977 | D | 0.674 | neutral | D | 0.52676829 | None | None | N |
A/W | 0.9991 | likely_pathogenic | 0.9986 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/Y | 0.9943 | likely_pathogenic | 0.9925 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.