Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34348 | 103267;103268;103269 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
N2AB | 32707 | 98344;98345;98346 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
N2A | 31780 | 95563;95564;95565 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
N2B | 25283 | 76072;76073;76074 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
Novex-1 | 25408 | 76447;76448;76449 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
Novex-2 | 25475 | 76648;76649;76650 | chr2:178533573;178533572;178533571 | chr2:179398300;179398299;179398298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1559027230 | None | 0.235 | D | 0.673 | 0.559 | 0.768588911288 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9811 | likely_pathogenic | 0.9822 | pathogenic | -2.992 | Highly Destabilizing | 0.983 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/C | 0.9782 | likely_pathogenic | 0.978 | pathogenic | -2.552 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.697 | Highly Destabilizing | 0.998 | D | 0.919 | deleterious | None | None | None | None | N |
L/E | 0.9985 | likely_pathogenic | 0.9987 | pathogenic | -3.408 | Highly Destabilizing | 0.995 | D | 0.926 | deleterious | None | None | None | None | N |
L/F | 0.8989 | likely_pathogenic | 0.9015 | pathogenic | -1.77 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
L/G | 0.9958 | likely_pathogenic | 0.9959 | pathogenic | -3.593 | Highly Destabilizing | 0.998 | D | 0.919 | deleterious | None | None | None | None | N |
L/H | 0.9972 | likely_pathogenic | 0.9977 | pathogenic | -3.153 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/I | 0.4064 | ambiguous | 0.4057 | ambiguous | -1.199 | Destabilizing | 0.991 | D | 0.635 | neutral | None | None | None | None | N |
L/K | 0.997 | likely_pathogenic | 0.9974 | pathogenic | -2.337 | Highly Destabilizing | 0.995 | D | 0.908 | deleterious | None | None | None | None | N |
L/M | 0.5949 | likely_pathogenic | 0.6009 | pathogenic | -1.417 | Destabilizing | 0.999 | D | 0.801 | deleterious | N | 0.510530263 | None | None | N |
L/N | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -2.946 | Highly Destabilizing | 0.998 | D | 0.924 | deleterious | None | None | None | None | N |
L/P | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -1.786 | Destabilizing | 0.235 | N | 0.673 | neutral | D | 0.540751292 | None | None | N |
L/Q | 0.9952 | likely_pathogenic | 0.9962 | pathogenic | -2.677 | Highly Destabilizing | 0.997 | D | 0.924 | deleterious | D | 0.540751292 | None | None | N |
L/R | 0.9936 | likely_pathogenic | 0.9946 | pathogenic | -2.185 | Highly Destabilizing | 0.997 | D | 0.918 | deleterious | D | 0.529394987 | None | None | N |
L/S | 0.9986 | likely_pathogenic | 0.9988 | pathogenic | -3.595 | Highly Destabilizing | 0.995 | D | 0.893 | deleterious | None | None | None | None | N |
L/T | 0.9917 | likely_pathogenic | 0.9929 | pathogenic | -3.146 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
L/V | 0.501 | ambiguous | 0.506 | ambiguous | -1.786 | Destabilizing | 0.989 | D | 0.631 | neutral | N | 0.495177868 | None | None | N |
L/W | 0.9939 | likely_pathogenic | 0.9946 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/Y | 0.9901 | likely_pathogenic | 0.9904 | pathogenic | -2.027 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.