Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34350 | 103273;103274;103275 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
N2AB | 32709 | 98350;98351;98352 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
N2A | 31782 | 95569;95570;95571 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
N2B | 25285 | 76078;76079;76080 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
Novex-1 | 25410 | 76453;76454;76455 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
Novex-2 | 25477 | 76654;76655;76656 | chr2:178533567;178533566;178533565 | chr2:179398294;179398293;179398292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.09 | N | 0.701 | 0.325 | 0.37097340754 | gnomAD-4.0.0 | 4.77319E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57305E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8782 | likely_pathogenic | 0.8727 | pathogenic | -1.546 | Destabilizing | 0.581 | D | 0.673 | neutral | D | 0.527904184 | None | None | N |
V/C | 0.9799 | likely_pathogenic | 0.9787 | pathogenic | -1.4 | Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -1.846 | Destabilizing | 0.929 | D | 0.804 | deleterious | None | None | None | None | N |
V/E | 0.9918 | likely_pathogenic | 0.9932 | pathogenic | -1.853 | Destabilizing | 0.908 | D | 0.794 | deleterious | D | 0.540185542 | None | None | N |
V/F | 0.9339 | likely_pathogenic | 0.9445 | pathogenic | -1.415 | Destabilizing | 0.866 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.9608 | likely_pathogenic | 0.9641 | pathogenic | -1.833 | Destabilizing | 0.908 | D | 0.775 | deleterious | D | 0.540185542 | None | None | N |
V/H | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -1.326 | Destabilizing | 0.993 | D | 0.781 | deleterious | None | None | None | None | N |
V/I | 0.1174 | likely_benign | 0.1125 | benign | -0.852 | Destabilizing | 0.004 | N | 0.556 | neutral | N | 0.504186927 | None | None | N |
V/K | 0.9911 | likely_pathogenic | 0.9925 | pathogenic | -1.179 | Destabilizing | 0.929 | D | 0.795 | deleterious | None | None | None | None | N |
V/L | 0.7806 | likely_pathogenic | 0.8 | pathogenic | -0.852 | Destabilizing | 0.09 | N | 0.701 | prob.neutral | N | 0.515280431 | None | None | N |
V/M | 0.7919 | likely_pathogenic | 0.8015 | pathogenic | -0.755 | Destabilizing | 0.866 | D | 0.822 | deleterious | None | None | None | None | N |
V/N | 0.9892 | likely_pathogenic | 0.991 | pathogenic | -1.093 | Destabilizing | 0.976 | D | 0.814 | deleterious | None | None | None | None | N |
V/P | 0.98 | likely_pathogenic | 0.9832 | pathogenic | -1.052 | Destabilizing | 0.976 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.9922 | likely_pathogenic | 0.9929 | pathogenic | -1.338 | Destabilizing | 0.976 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.9863 | likely_pathogenic | 0.9879 | pathogenic | -0.673 | Destabilizing | 0.929 | D | 0.813 | deleterious | None | None | None | None | N |
V/S | 0.9658 | likely_pathogenic | 0.9673 | pathogenic | -1.595 | Destabilizing | 0.929 | D | 0.772 | deleterious | None | None | None | None | N |
V/T | 0.8861 | likely_pathogenic | 0.8855 | pathogenic | -1.499 | Destabilizing | 0.648 | D | 0.746 | deleterious | None | None | None | None | N |
V/W | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.563 | Destabilizing | 0.993 | D | 0.762 | deleterious | None | None | None | None | N |
V/Y | 0.9956 | likely_pathogenic | 0.9959 | pathogenic | -1.242 | Destabilizing | 0.929 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.