Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34368 | 103327;103328;103329 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
N2AB | 32727 | 98404;98405;98406 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
N2A | 31800 | 95623;95624;95625 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
N2B | 25303 | 76132;76133;76134 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
Novex-1 | 25428 | 76507;76508;76509 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
Novex-2 | 25495 | 76708;76709;76710 | chr2:178533513;178533512;178533511 | chr2:179398240;179398239;179398238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.997 | N | 0.804 | 0.555 | 0.834087401315 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9314 | likely_pathogenic | 0.8651 | pathogenic | -1.033 | Destabilizing | 0.991 | D | 0.69 | prob.neutral | None | None | None | None | I |
L/C | 0.9781 | likely_pathogenic | 0.9555 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
L/D | 0.9961 | likely_pathogenic | 0.9897 | pathogenic | -0.118 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | I |
L/E | 0.9771 | likely_pathogenic | 0.9477 | pathogenic | -0.113 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
L/F | 0.8286 | likely_pathogenic | 0.6888 | pathogenic | -0.57 | Destabilizing | 0.235 | N | 0.323 | neutral | N | 0.495082733 | None | None | I |
L/G | 0.9818 | likely_pathogenic | 0.9584 | pathogenic | -1.322 | Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | I |
L/H | 0.9489 | likely_pathogenic | 0.8834 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
L/I | 0.5645 | likely_pathogenic | 0.4488 | ambiguous | -0.336 | Destabilizing | 0.955 | D | 0.471 | neutral | N | 0.478209126 | None | None | I |
L/K | 0.9061 | likely_pathogenic | 0.8406 | pathogenic | -0.566 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
L/M | 0.5465 | ambiguous | 0.4366 | ambiguous | -0.483 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | I |
L/N | 0.967 | likely_pathogenic | 0.9322 | pathogenic | -0.463 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | I |
L/P | 0.9238 | likely_pathogenic | 0.8266 | pathogenic | -0.535 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | I |
L/Q | 0.9062 | likely_pathogenic | 0.8102 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
L/R | 0.8952 | likely_pathogenic | 0.7984 | pathogenic | -0.103 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
L/S | 0.9791 | likely_pathogenic | 0.947 | pathogenic | -1.087 | Destabilizing | 0.997 | D | 0.804 | deleterious | N | 0.443229761 | None | None | I |
L/T | 0.9406 | likely_pathogenic | 0.8853 | pathogenic | -0.954 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | I |
L/V | 0.6438 | likely_pathogenic | 0.5022 | ambiguous | -0.535 | Destabilizing | 0.977 | D | 0.532 | neutral | N | 0.44921437 | None | None | I |
L/W | 0.9518 | likely_pathogenic | 0.8869 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
L/Y | 0.9512 | likely_pathogenic | 0.9035 | pathogenic | -0.374 | Destabilizing | 0.99 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.