Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34389 | 103390;103391;103392 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
N2AB | 32748 | 98467;98468;98469 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
N2A | 31821 | 95686;95687;95688 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
N2B | 25324 | 76195;76196;76197 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
Novex-1 | 25449 | 76570;76571;76572 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
Novex-2 | 25516 | 76771;76772;76773 | chr2:178533450;178533449;178533448 | chr2:179398177;179398176;179398175 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs796349969 | None | 0.022 | N | 0.234 | 0.098 | 0.437850553699 | gnomAD-4.0.0 | 3.18283E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71716E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7348 | likely_pathogenic | 0.5206 | ambiguous | -0.454 | Destabilizing | 0.525 | D | 0.411 | neutral | None | None | None | None | I |
I/C | 0.8813 | likely_pathogenic | 0.7677 | pathogenic | -0.612 | Destabilizing | 0.998 | D | 0.459 | neutral | None | None | None | None | I |
I/D | 0.8639 | likely_pathogenic | 0.7223 | pathogenic | -0.323 | Destabilizing | 0.842 | D | 0.515 | neutral | None | None | None | None | I |
I/E | 0.7814 | likely_pathogenic | 0.6216 | pathogenic | -0.424 | Destabilizing | 0.842 | D | 0.535 | neutral | None | None | None | None | I |
I/F | 0.2403 | likely_benign | 0.1607 | benign | -0.618 | Destabilizing | 0.966 | D | 0.379 | neutral | N | 0.4563482 | None | None | I |
I/G | 0.937 | likely_pathogenic | 0.8242 | pathogenic | -0.573 | Destabilizing | 0.842 | D | 0.529 | neutral | None | None | None | None | I |
I/H | 0.6787 | likely_pathogenic | 0.4718 | ambiguous | 0.091 | Stabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | I |
I/K | 0.653 | likely_pathogenic | 0.4427 | ambiguous | -0.292 | Destabilizing | 0.842 | D | 0.526 | neutral | None | None | None | None | I |
I/L | 0.1871 | likely_benign | 0.129 | benign | -0.268 | Destabilizing | 0.267 | N | 0.252 | neutral | N | 0.490479416 | None | None | I |
I/M | 0.1656 | likely_benign | 0.113 | benign | -0.459 | Destabilizing | 0.966 | D | 0.387 | neutral | D | 0.524669347 | None | None | I |
I/N | 0.3953 | ambiguous | 0.2332 | benign | -0.089 | Destabilizing | 0.934 | D | 0.51 | neutral | N | 0.454422615 | None | None | I |
I/P | 0.9771 | likely_pathogenic | 0.9526 | pathogenic | -0.3 | Destabilizing | 0.974 | D | 0.519 | neutral | None | None | None | None | I |
I/Q | 0.6514 | likely_pathogenic | 0.4555 | ambiguous | -0.313 | Destabilizing | 0.974 | D | 0.522 | neutral | None | None | None | None | I |
I/R | 0.6078 | likely_pathogenic | 0.3907 | ambiguous | 0.239 | Stabilizing | 0.949 | D | 0.52 | neutral | None | None | None | None | I |
I/S | 0.5309 | ambiguous | 0.3257 | benign | -0.462 | Destabilizing | 0.136 | N | 0.359 | neutral | N | 0.423542348 | None | None | I |
I/T | 0.4643 | ambiguous | 0.2756 | benign | -0.461 | Destabilizing | 0.051 | N | 0.271 | neutral | N | 0.465119612 | None | None | I |
I/V | 0.1319 | likely_benign | 0.0943 | benign | -0.3 | Destabilizing | 0.022 | N | 0.234 | neutral | N | 0.466909123 | None | None | I |
I/W | 0.8903 | likely_pathogenic | 0.8144 | pathogenic | -0.64 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | I |
I/Y | 0.6316 | likely_pathogenic | 0.4901 | ambiguous | -0.388 | Destabilizing | 0.991 | D | 0.458 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.