Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34391 | 103396;103397;103398 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
N2AB | 32750 | 98473;98474;98475 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
N2A | 31823 | 95692;95693;95694 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
N2B | 25326 | 76201;76202;76203 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
Novex-1 | 25451 | 76576;76577;76578 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
Novex-2 | 25518 | 76777;76778;76779 | chr2:178533444;178533443;178533442 | chr2:179398171;179398170;179398169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs775343253 | -0.398 | 0.012 | N | 0.437 | 0.148 | 0.30212335484 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | I | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.81E-06 | 0 |
P/L | rs775343253 | -0.398 | 0.012 | N | 0.437 | 0.148 | 0.30212335484 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs775343253 | -0.398 | 0.012 | N | 0.437 | 0.148 | 0.30212335484 | gnomAD-4.0.0 | 2.04512E-05 | None | None | None | None | I | None | 1.33511E-05 | 0 | None | 0 | 0 | None | 1.56465E-05 | 0 | 2.62755E-05 | 0 | 0 |
P/Q | None | -0.608 | 0.055 | N | 0.457 | 0.105 | 0.152612264143 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/Q | None | -0.608 | 0.055 | N | 0.457 | 0.105 | 0.152612264143 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | I | None | 0 | 4.47227E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs775343253 | -0.062 | None | N | 0.217 | 0.169 | 0.171388866994 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
P/R | rs775343253 | -0.062 | None | N | 0.217 | 0.169 | 0.171388866994 | gnomAD-4.0.0 | 2.73696E-06 | None | None | None | None | I | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 2.69834E-06 | 0 | 0 |
P/S | None | None | None | N | 0.155 | 0.087 | 0.117506650769 | gnomAD-4.0.0 | 6.36503E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57407E-06 | 0 | 3.02407E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0753 | likely_benign | 0.0596 | benign | -0.47 | Destabilizing | None | N | 0.169 | neutral | N | 0.456001483 | None | None | I |
P/C | 0.5917 | likely_pathogenic | 0.4022 | ambiguous | -0.523 | Destabilizing | 0.356 | N | 0.551 | neutral | None | None | None | None | I |
P/D | 0.607 | likely_pathogenic | 0.3853 | ambiguous | -0.479 | Destabilizing | 0.031 | N | 0.383 | neutral | None | None | None | None | I |
P/E | 0.3345 | likely_benign | 0.2115 | benign | -0.603 | Destabilizing | 0.016 | N | 0.381 | neutral | None | None | None | None | I |
P/F | 0.5643 | likely_pathogenic | 0.3475 | ambiguous | -0.757 | Destabilizing | 0.356 | N | 0.572 | neutral | None | None | None | None | I |
P/G | 0.4859 | ambiguous | 0.3033 | benign | -0.591 | Destabilizing | 0.007 | N | 0.397 | neutral | None | None | None | None | I |
P/H | 0.2553 | likely_benign | 0.1451 | benign | -0.189 | Destabilizing | 0.356 | N | 0.547 | neutral | None | None | None | None | I |
P/I | 0.2822 | likely_benign | 0.1795 | benign | -0.301 | Destabilizing | 0.072 | N | 0.545 | neutral | None | None | None | None | I |
P/K | 0.286 | likely_benign | 0.1583 | benign | -0.468 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | I |
P/L | 0.1284 | likely_benign | 0.0803 | benign | -0.301 | Destabilizing | 0.012 | N | 0.437 | neutral | N | 0.447536715 | None | None | I |
P/M | 0.306 | likely_benign | 0.1902 | benign | -0.327 | Destabilizing | 0.356 | N | 0.548 | neutral | None | None | None | None | I |
P/N | 0.4247 | ambiguous | 0.2496 | benign | -0.142 | Destabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | I |
P/Q | 0.1699 | likely_benign | 0.1019 | benign | -0.417 | Destabilizing | 0.055 | N | 0.457 | neutral | N | 0.459540433 | None | None | I |
P/R | 0.2216 | likely_benign | 0.1317 | benign | 0.088 | Stabilizing | None | N | 0.217 | neutral | N | 0.435415567 | None | None | I |
P/S | 0.1442 | likely_benign | 0.0974 | benign | -0.454 | Destabilizing | None | N | 0.155 | neutral | N | 0.47529932 | None | None | I |
P/T | 0.1198 | likely_benign | 0.0817 | benign | -0.484 | Destabilizing | None | N | 0.159 | neutral | N | 0.429622958 | None | None | I |
P/V | 0.1941 | likely_benign | 0.13 | benign | -0.323 | Destabilizing | 0.016 | N | 0.459 | neutral | None | None | None | None | I |
P/W | 0.7998 | likely_pathogenic | 0.595 | pathogenic | -0.836 | Destabilizing | 0.864 | D | 0.553 | neutral | None | None | None | None | I |
P/Y | 0.5348 | ambiguous | 0.3491 | ambiguous | -0.541 | Destabilizing | 0.356 | N | 0.577 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.