Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34395 | 103408;103409;103410 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
N2AB | 32754 | 98485;98486;98487 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
N2A | 31827 | 95704;95705;95706 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
N2B | 25330 | 76213;76214;76215 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
Novex-1 | 25455 | 76588;76589;76590 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
Novex-2 | 25522 | 76789;76790;76791 | chr2:178533432;178533431;178533430 | chr2:179398159;179398158;179398157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs368320079 | 0.021 | 0.968 | N | 0.646 | 0.238 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/Q | rs368320079 | 0.021 | 0.968 | N | 0.646 | 0.238 | None | gnomAD-4.0.0 | 3.18218E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7154E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5911 | likely_pathogenic | 0.5658 | pathogenic | -0.206 | Destabilizing | 0.851 | D | 0.609 | neutral | None | None | None | None | I |
K/C | 0.771 | likely_pathogenic | 0.7374 | pathogenic | -0.225 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
K/D | 0.8969 | likely_pathogenic | 0.866 | pathogenic | 0.148 | Stabilizing | 0.851 | D | 0.621 | neutral | None | None | None | None | I |
K/E | 0.3871 | ambiguous | 0.326 | benign | 0.207 | Stabilizing | 0.103 | N | 0.389 | neutral | N | 0.489343265 | None | None | I |
K/F | 0.8841 | likely_pathogenic | 0.8501 | pathogenic | -0.107 | Destabilizing | 0.988 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/G | 0.853 | likely_pathogenic | 0.8332 | pathogenic | -0.509 | Destabilizing | 0.919 | D | 0.636 | neutral | None | None | None | None | I |
K/H | 0.3602 | ambiguous | 0.3196 | benign | -0.889 | Destabilizing | 0.076 | N | 0.455 | neutral | None | None | None | None | I |
K/I | 0.4102 | ambiguous | 0.3463 | ambiguous | 0.542 | Stabilizing | 0.968 | D | 0.709 | prob.delet. | N | 0.498216252 | None | None | I |
K/L | 0.4395 | ambiguous | 0.4263 | ambiguous | 0.542 | Stabilizing | 0.851 | D | 0.646 | neutral | None | None | None | None | I |
K/M | 0.3297 | likely_benign | 0.3039 | benign | 0.394 | Stabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | I |
K/N | 0.6962 | likely_pathogenic | 0.631 | pathogenic | 0.07 | Stabilizing | 0.896 | D | 0.601 | neutral | N | 0.484580374 | None | None | I |
K/P | 0.9939 | likely_pathogenic | 0.9907 | pathogenic | 0.324 | Stabilizing | 0.988 | D | 0.67 | neutral | None | None | None | None | I |
K/Q | 0.156 | likely_benign | 0.143 | benign | -0.071 | Destabilizing | 0.968 | D | 0.646 | neutral | N | 0.494405156 | None | None | I |
K/R | 0.104 | likely_benign | 0.0988 | benign | -0.278 | Destabilizing | 0.896 | D | 0.602 | neutral | N | 0.482092006 | None | None | I |
K/S | 0.6603 | likely_pathogenic | 0.617 | pathogenic | -0.528 | Destabilizing | 0.851 | D | 0.611 | neutral | None | None | None | None | I |
K/T | 0.2261 | likely_benign | 0.2031 | benign | -0.285 | Destabilizing | 0.103 | N | 0.389 | neutral | N | 0.426198651 | None | None | I |
K/V | 0.4154 | ambiguous | 0.3684 | ambiguous | 0.324 | Stabilizing | 0.851 | D | 0.65 | neutral | None | None | None | None | I |
K/W | 0.8996 | likely_pathogenic | 0.8676 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/Y | 0.7968 | likely_pathogenic | 0.7527 | pathogenic | 0.289 | Stabilizing | 0.976 | D | 0.694 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.