Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34402 | 103429;103430;103431 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
N2AB | 32761 | 98506;98507;98508 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
N2A | 31834 | 95725;95726;95727 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
N2B | 25337 | 76234;76235;76236 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
Novex-1 | 25462 | 76609;76610;76611 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
Novex-2 | 25529 | 76810;76811;76812 | chr2:178533411;178533410;178533409 | chr2:179398138;179398137;179398136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1361480669 | None | 0.58 | N | 0.299 | 0.29 | 0.329540904979 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0929 | likely_benign | 0.0832 | benign | -0.485 | Destabilizing | 0.046 | N | 0.321 | neutral | N | 0.506334303 | None | None | N |
P/C | 0.6136 | likely_pathogenic | 0.5893 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
P/D | 0.5109 | ambiguous | 0.4758 | ambiguous | -0.277 | Destabilizing | 0.986 | D | 0.625 | neutral | None | None | None | None | N |
P/E | 0.2891 | likely_benign | 0.2629 | benign | -0.398 | Destabilizing | 0.986 | D | 0.613 | neutral | None | None | None | None | N |
P/F | 0.5435 | ambiguous | 0.5266 | ambiguous | -0.737 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
P/G | 0.5003 | ambiguous | 0.4789 | ambiguous | -0.609 | Destabilizing | 0.91 | D | 0.536 | neutral | None | None | None | None | N |
P/H | 0.244 | likely_benign | 0.2358 | benign | -0.179 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/I | 0.2824 | likely_benign | 0.2545 | benign | -0.311 | Destabilizing | 0.986 | D | 0.778 | deleterious | None | None | None | None | N |
P/K | 0.3593 | ambiguous | 0.3552 | ambiguous | -0.405 | Destabilizing | 0.986 | D | 0.61 | neutral | None | None | None | None | N |
P/L | 0.1172 | likely_benign | 0.1116 | benign | -0.311 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | N | 0.473723239 | None | None | N |
P/M | 0.3244 | likely_benign | 0.2932 | benign | -0.337 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
P/N | 0.4238 | ambiguous | 0.4015 | ambiguous | -0.144 | Destabilizing | 0.986 | D | 0.747 | deleterious | None | None | None | None | N |
P/Q | 0.1834 | likely_benign | 0.1699 | benign | -0.41 | Destabilizing | 0.991 | D | 0.689 | prob.neutral | N | 0.502659279 | None | None | N |
P/R | 0.2454 | likely_benign | 0.2499 | benign | 0.129 | Stabilizing | 0.991 | D | 0.738 | prob.delet. | N | 0.514223067 | None | None | N |
P/S | 0.1709 | likely_benign | 0.1582 | benign | -0.506 | Destabilizing | 0.58 | D | 0.299 | neutral | N | 0.492693002 | None | None | N |
P/T | 0.1267 | likely_benign | 0.1154 | benign | -0.528 | Destabilizing | 0.939 | D | 0.575 | neutral | N | 0.504160789 | None | None | N |
P/V | 0.2072 | likely_benign | 0.1869 | benign | -0.334 | Destabilizing | 0.973 | D | 0.622 | neutral | None | None | None | None | N |
P/W | 0.7536 | likely_pathogenic | 0.7546 | pathogenic | -0.803 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/Y | 0.5075 | ambiguous | 0.4925 | ambiguous | -0.5 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.