Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34403 | 103432;103433;103434 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
N2AB | 32762 | 98509;98510;98511 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
N2A | 31835 | 95728;95729;95730 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
N2B | 25338 | 76237;76238;76239 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
Novex-1 | 25463 | 76612;76613;76614 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
Novex-2 | 25530 | 76813;76814;76815 | chr2:178533408;178533407;178533406 | chr2:179398135;179398134;179398133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs773892755 | -1.148 | 0.999 | N | 0.51 | 0.405 | 0.541466613703 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/V | rs773892755 | -1.148 | 0.999 | N | 0.51 | 0.405 | 0.541466613703 | gnomAD-4.0.0 | 6.8422E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9423 | likely_pathogenic | 0.9384 | pathogenic | -2.239 | Highly Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
L/C | 0.9605 | likely_pathogenic | 0.9592 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/E | 0.9938 | likely_pathogenic | 0.9934 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/F | 0.7725 | likely_pathogenic | 0.7212 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/G | 0.9951 | likely_pathogenic | 0.9947 | pathogenic | -2.709 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/H | 0.9875 | likely_pathogenic | 0.9854 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/I | 0.1626 | likely_benign | 0.1427 | benign | -0.917 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
L/K | 0.9887 | likely_pathogenic | 0.9883 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/M | 0.4807 | ambiguous | 0.4554 | ambiguous | -0.806 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.49394626 | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9947 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/P | 0.9754 | likely_pathogenic | 0.9774 | pathogenic | -1.335 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.530181223 | None | None | N |
L/Q | 0.9804 | likely_pathogenic | 0.9787 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.523686763 | None | None | N |
L/R | 0.9771 | likely_pathogenic | 0.9762 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.541537528 | None | None | N |
L/S | 0.9919 | likely_pathogenic | 0.9907 | pathogenic | -2.514 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/T | 0.9582 | likely_pathogenic | 0.9562 | pathogenic | -2.195 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
L/V | 0.2219 | likely_benign | 0.2059 | benign | -1.335 | Destabilizing | 0.999 | D | 0.51 | neutral | N | 0.461567592 | None | None | N |
L/W | 0.9765 | likely_pathogenic | 0.9708 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/Y | 0.9785 | likely_pathogenic | 0.9738 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.