Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34407 | 103444;103445;103446 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
N2AB | 32766 | 98521;98522;98523 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
N2A | 31839 | 95740;95741;95742 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
N2B | 25342 | 76249;76250;76251 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
Novex-1 | 25467 | 76624;76625;76626 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
Novex-2 | 25534 | 76825;76826;76827 | chr2:178533396;178533395;178533394 | chr2:179398123;179398122;179398121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.003 | N | 0.226 | 0.171 | 0.19670166235 | gnomAD-4.0.0 | 6.84296E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99416E-07 | 0 | 0 |
P/S | rs1438404457 | 0.108 | 0.338 | N | 0.314 | 0.154 | 0.210429274316 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs1438404457 | 0.108 | 0.338 | N | 0.314 | 0.154 | 0.210429274316 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1438404457 | 0.108 | 0.338 | N | 0.314 | 0.154 | 0.210429274316 | gnomAD-4.0.0 | 1.85928E-06 | None | None | None | None | I | None | 2.66987E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47554E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1048 | likely_benign | 0.0999 | benign | -0.298 | Destabilizing | 0.003 | N | 0.226 | neutral | N | 0.512777486 | None | None | I |
P/C | 0.5565 | ambiguous | 0.4857 | ambiguous | -0.681 | Destabilizing | 0.973 | D | 0.482 | neutral | None | None | None | None | I |
P/D | 0.3347 | likely_benign | 0.3438 | ambiguous | -0.311 | Destabilizing | 0.826 | D | 0.309 | neutral | None | None | None | None | I |
P/E | 0.2197 | likely_benign | 0.2297 | benign | -0.428 | Destabilizing | 0.575 | D | 0.337 | neutral | None | None | None | None | I |
P/F | 0.6575 | likely_pathogenic | 0.5911 | pathogenic | -0.641 | Destabilizing | 0.906 | D | 0.452 | neutral | None | None | None | None | I |
P/G | 0.3461 | ambiguous | 0.307 | benign | -0.375 | Destabilizing | 0.404 | N | 0.347 | neutral | None | None | None | None | I |
P/H | 0.1866 | likely_benign | 0.1706 | benign | 0.038 | Stabilizing | 0.003 | N | 0.265 | neutral | N | 0.498290823 | None | None | I |
P/I | 0.4532 | ambiguous | 0.3881 | ambiguous | -0.241 | Destabilizing | 0.704 | D | 0.441 | neutral | None | None | None | None | I |
P/K | 0.2243 | likely_benign | 0.2297 | benign | -0.36 | Destabilizing | 0.575 | D | 0.345 | neutral | None | None | None | None | I |
P/L | 0.1931 | likely_benign | 0.1752 | benign | -0.241 | Destabilizing | 0.338 | N | 0.395 | neutral | N | 0.486515704 | None | None | I |
P/M | 0.4063 | ambiguous | 0.3442 | ambiguous | -0.485 | Destabilizing | 0.973 | D | 0.417 | neutral | None | None | None | None | I |
P/N | 0.2955 | likely_benign | 0.2497 | benign | -0.123 | Destabilizing | 0.826 | D | 0.365 | neutral | None | None | None | None | I |
P/Q | 0.1436 | likely_benign | 0.136 | benign | -0.346 | Destabilizing | 0.906 | D | 0.323 | neutral | None | None | None | None | I |
P/R | 0.1583 | likely_benign | 0.1653 | benign | 0.106 | Stabilizing | 0.782 | D | 0.399 | neutral | N | 0.500040262 | None | None | I |
P/S | 0.1335 | likely_benign | 0.1206 | benign | -0.431 | Destabilizing | 0.338 | N | 0.314 | neutral | N | 0.483532014 | None | None | I |
P/T | 0.1224 | likely_benign | 0.1024 | benign | -0.456 | Destabilizing | 0.007 | N | 0.228 | neutral | N | 0.52020489 | None | None | I |
P/V | 0.3123 | likely_benign | 0.28 | benign | -0.23 | Destabilizing | 0.404 | N | 0.361 | neutral | None | None | None | None | I |
P/W | 0.6965 | likely_pathogenic | 0.6698 | pathogenic | -0.712 | Destabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | I |
P/Y | 0.5288 | ambiguous | 0.4807 | ambiguous | -0.425 | Destabilizing | 0.826 | D | 0.441 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.