Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34413 | 103462;103463;103464 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
N2AB | 32772 | 98539;98540;98541 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
N2A | 31845 | 95758;95759;95760 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
N2B | 25348 | 76267;76268;76269 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
Novex-1 | 25473 | 76642;76643;76644 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
Novex-2 | 25540 | 76843;76844;76845 | chr2:178533378;178533377;178533376 | chr2:179398105;179398104;179398103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs778415445 | -0.585 | 0.921 | N | 0.485 | 0.4 | None | gnomAD-2.1.1 | 1.3205E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.4881E-03 | 0 | 0 |
H/R | rs778415445 | -0.585 | 0.921 | N | 0.485 | 0.4 | None | gnomAD-3.1.2 | 1.31437E-04 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 1.88288E-03 | 0 | 0 | 0 | 0 |
H/R | rs778415445 | -0.585 | 0.921 | N | 0.485 | 0.4 | None | gnomAD-4.0.0 | 1.21732E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.46591E-03 | 0 | 0 | 1.33998E-05 | 2.84398E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7282 | likely_pathogenic | 0.6299 | pathogenic | -0.572 | Destabilizing | 0.969 | D | 0.57 | neutral | None | None | None | None | I |
H/C | 0.4271 | ambiguous | 0.3638 | ambiguous | 0.026 | Stabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | I |
H/D | 0.6693 | likely_pathogenic | 0.5543 | ambiguous | -0.412 | Destabilizing | 0.959 | D | 0.508 | neutral | N | 0.447208641 | None | None | I |
H/E | 0.592 | likely_pathogenic | 0.4851 | ambiguous | -0.321 | Destabilizing | 0.864 | D | 0.478 | neutral | None | None | None | None | I |
H/F | 0.6696 | likely_pathogenic | 0.6132 | pathogenic | 0.644 | Stabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | I |
H/G | 0.7571 | likely_pathogenic | 0.6544 | pathogenic | -0.916 | Destabilizing | 0.984 | D | 0.553 | neutral | None | None | None | None | I |
H/I | 0.8191 | likely_pathogenic | 0.7539 | pathogenic | 0.366 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
H/K | 0.4957 | ambiguous | 0.4215 | ambiguous | -0.369 | Destabilizing | 0.293 | N | 0.325 | neutral | None | None | None | None | I |
H/L | 0.4394 | ambiguous | 0.3744 | ambiguous | 0.366 | Stabilizing | 0.959 | D | 0.565 | neutral | N | 0.48276401 | None | None | I |
H/M | 0.8361 | likely_pathogenic | 0.7766 | pathogenic | 0.109 | Stabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
H/N | 0.3379 | likely_benign | 0.2505 | benign | -0.655 | Destabilizing | 0.979 | D | 0.495 | neutral | N | 0.444995055 | None | None | I |
H/P | 0.5154 | ambiguous | 0.3873 | ambiguous | 0.075 | Stabilizing | 0.998 | D | 0.55 | neutral | N | 0.436954362 | None | None | I |
H/Q | 0.3746 | ambiguous | 0.2886 | benign | -0.449 | Destabilizing | 0.476 | N | 0.213 | neutral | N | 0.416693733 | None | None | I |
H/R | 0.22 | likely_benign | 0.1769 | benign | -0.777 | Destabilizing | 0.921 | D | 0.485 | neutral | N | 0.439589236 | None | None | I |
H/S | 0.5362 | ambiguous | 0.4565 | ambiguous | -0.68 | Destabilizing | 0.969 | D | 0.523 | neutral | None | None | None | None | I |
H/T | 0.6855 | likely_pathogenic | 0.59 | pathogenic | -0.476 | Destabilizing | 0.984 | D | 0.551 | neutral | None | None | None | None | I |
H/V | 0.7394 | likely_pathogenic | 0.6728 | pathogenic | 0.075 | Stabilizing | 0.995 | D | 0.549 | neutral | None | None | None | None | I |
H/W | 0.571 | likely_pathogenic | 0.5499 | ambiguous | 0.953 | Stabilizing | 1.0 | D | 0.58 | neutral | None | None | None | None | I |
H/Y | 0.2413 | likely_benign | 0.1971 | benign | 1.001 | Stabilizing | 0.993 | D | 0.515 | neutral | N | 0.451806385 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.