Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34419 | 103480;103481;103482 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
N2AB | 32778 | 98557;98558;98559 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
N2A | 31851 | 95776;95777;95778 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
N2B | 25354 | 76285;76286;76287 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
Novex-1 | 25479 | 76660;76661;76662 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
Novex-2 | 25546 | 76861;76862;76863 | chr2:178533360;178533359;178533358 | chr2:179398087;179398086;179398085 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.026 | N | 0.512 | 0.294 | 0.412980791724 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
Y/H | None | None | 0.059 | N | 0.516 | 0.291 | 0.309530620856 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9316 | likely_pathogenic | 0.8822 | pathogenic | -2.971 | Highly Destabilizing | 0.959 | D | 0.674 | neutral | None | None | None | None | N |
Y/C | 0.5166 | ambiguous | 0.3458 | ambiguous | -1.682 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.44817422 | None | None | N |
Y/D | 0.9651 | likely_pathogenic | 0.9262 | pathogenic | -3.55 | Highly Destabilizing | 0.984 | D | 0.789 | deleterious | N | 0.503218061 | None | None | N |
Y/E | 0.9862 | likely_pathogenic | 0.9709 | pathogenic | -3.346 | Highly Destabilizing | 0.976 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/F | 0.1769 | likely_benign | 0.128 | benign | -1.016 | Destabilizing | 0.026 | N | 0.512 | neutral | N | 0.502680709 | None | None | N |
Y/G | 0.9531 | likely_pathogenic | 0.9254 | pathogenic | -3.379 | Highly Destabilizing | 0.988 | D | 0.745 | deleterious | None | None | None | None | N |
Y/H | 0.6377 | likely_pathogenic | 0.44 | ambiguous | -2.089 | Highly Destabilizing | 0.059 | N | 0.516 | neutral | N | 0.474147313 | None | None | N |
Y/I | 0.8944 | likely_pathogenic | 0.8312 | pathogenic | -1.608 | Destabilizing | 0.952 | D | 0.693 | prob.neutral | None | None | None | None | N |
Y/K | 0.973 | likely_pathogenic | 0.9506 | pathogenic | -2.152 | Highly Destabilizing | 0.988 | D | 0.751 | deleterious | None | None | None | None | N |
Y/L | 0.8474 | likely_pathogenic | 0.7881 | pathogenic | -1.608 | Destabilizing | 0.851 | D | 0.627 | neutral | None | None | None | None | N |
Y/M | 0.9268 | likely_pathogenic | 0.8848 | pathogenic | -1.331 | Destabilizing | 0.997 | D | 0.712 | prob.delet. | None | None | None | None | N |
Y/N | 0.8825 | likely_pathogenic | 0.7691 | pathogenic | -2.971 | Highly Destabilizing | 0.968 | D | 0.76 | deleterious | N | 0.513820422 | None | None | N |
Y/P | 0.9973 | likely_pathogenic | 0.9954 | pathogenic | -2.078 | Highly Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
Y/Q | 0.9569 | likely_pathogenic | 0.9091 | pathogenic | -2.719 | Highly Destabilizing | 0.988 | D | 0.705 | prob.neutral | None | None | None | None | N |
Y/R | 0.9248 | likely_pathogenic | 0.8701 | pathogenic | -1.95 | Destabilizing | 0.976 | D | 0.755 | deleterious | None | None | None | None | N |
Y/S | 0.8201 | likely_pathogenic | 0.7022 | pathogenic | -3.265 | Highly Destabilizing | 0.984 | D | 0.71 | prob.delet. | N | 0.479051701 | None | None | N |
Y/T | 0.9082 | likely_pathogenic | 0.842 | pathogenic | -2.943 | Highly Destabilizing | 0.988 | D | 0.745 | deleterious | None | None | None | None | N |
Y/V | 0.7908 | likely_pathogenic | 0.7093 | pathogenic | -2.078 | Highly Destabilizing | 0.919 | D | 0.674 | neutral | None | None | None | None | N |
Y/W | 0.6946 | likely_pathogenic | 0.5912 | pathogenic | -0.393 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.