Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34427 | 103504;103505;103506 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
N2AB | 32786 | 98581;98582;98583 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
N2A | 31859 | 95800;95801;95802 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
N2B | 25362 | 76309;76310;76311 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
Novex-1 | 25487 | 76684;76685;76686 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
Novex-2 | 25554 | 76885;76886;76887 | chr2:178533336;178533335;178533334 | chr2:179398063;179398062;179398061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs759702754 | -0.993 | 0.781 | N | 0.757 | 0.427 | 0.552125808554 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/S | rs759702754 | -0.993 | 0.781 | N | 0.757 | 0.427 | 0.552125808554 | gnomAD-4.0.0 | 3.42117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.79656E-05 | 0 |
L/V | None | None | 0.201 | N | 0.441 | 0.075 | 0.324436698001 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85762E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4566 | ambiguous | 0.423 | ambiguous | -1.24 | Destabilizing | 0.399 | N | 0.58 | neutral | None | None | None | None | N |
L/C | 0.5554 | ambiguous | 0.5866 | pathogenic | -0.73 | Destabilizing | 0.982 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/D | 0.8442 | likely_pathogenic | 0.8275 | pathogenic | -0.761 | Destabilizing | 0.935 | D | 0.828 | deleterious | None | None | None | None | N |
L/E | 0.5256 | ambiguous | 0.4978 | ambiguous | -0.836 | Destabilizing | 0.826 | D | 0.822 | deleterious | None | None | None | None | N |
L/F | 0.1158 | likely_benign | 0.1144 | benign | -1.128 | Destabilizing | 0.002 | N | 0.305 | neutral | N | 0.421966267 | None | None | N |
L/G | 0.7727 | likely_pathogenic | 0.7375 | pathogenic | -1.468 | Destabilizing | 0.826 | D | 0.799 | deleterious | None | None | None | None | N |
L/H | 0.2462 | likely_benign | 0.2575 | benign | -0.694 | Destabilizing | 0.982 | D | 0.806 | deleterious | None | None | None | None | N |
L/I | 0.1923 | likely_benign | 0.1791 | benign | -0.732 | Destabilizing | 0.25 | N | 0.426 | neutral | None | None | None | None | N |
L/K | 0.2808 | likely_benign | 0.2569 | benign | -0.744 | Destabilizing | 0.826 | D | 0.775 | deleterious | None | None | None | None | N |
L/M | 0.1615 | likely_benign | 0.1515 | benign | -0.456 | Destabilizing | 0.781 | D | 0.706 | prob.neutral | N | 0.466757194 | None | None | N |
L/N | 0.5425 | ambiguous | 0.5081 | ambiguous | -0.479 | Destabilizing | 0.935 | D | 0.834 | deleterious | None | None | None | None | N |
L/P | 0.964 | likely_pathogenic | 0.9513 | pathogenic | -0.868 | Destabilizing | 0.935 | D | 0.83 | deleterious | None | None | None | None | N |
L/Q | 0.1959 | likely_benign | 0.1885 | benign | -0.763 | Destabilizing | 0.935 | D | 0.797 | deleterious | None | None | None | None | N |
L/R | 0.1902 | likely_benign | 0.1961 | benign | -0.07 | Destabilizing | 0.826 | D | 0.794 | deleterious | None | None | None | None | N |
L/S | 0.4323 | ambiguous | 0.4036 | ambiguous | -0.998 | Destabilizing | 0.781 | D | 0.757 | deleterious | N | 0.435567496 | None | None | N |
L/T | 0.4241 | ambiguous | 0.3912 | ambiguous | -0.965 | Destabilizing | 0.826 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/V | 0.1796 | likely_benign | 0.1677 | benign | -0.868 | Destabilizing | 0.201 | N | 0.441 | neutral | N | 0.450961023 | None | None | N |
L/W | 0.3508 | ambiguous | 0.3717 | ambiguous | -1.124 | Destabilizing | 0.931 | D | 0.789 | deleterious | N | 0.491061608 | None | None | N |
L/Y | 0.3246 | likely_benign | 0.3352 | benign | -0.895 | Destabilizing | 0.539 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.