Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34428 | 103507;103508;103509 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
N2AB | 32787 | 98584;98585;98586 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
N2A | 31860 | 95803;95804;95805 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
N2B | 25363 | 76312;76313;76314 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
Novex-1 | 25488 | 76687;76688;76689 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
Novex-2 | 25555 | 76888;76889;76890 | chr2:178533333;178533332;178533331 | chr2:179398060;179398059;179398058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.217 | N | 0.419 | 0.291 | 0.335414705075 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85767E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2435 | likely_benign | 0.2137 | benign | -1.03 | Destabilizing | 0.994 | D | 0.387 | neutral | N | 0.484367094 | None | None | N |
P/C | 0.9002 | likely_pathogenic | 0.8731 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/D | 0.9348 | likely_pathogenic | 0.9125 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
P/E | 0.7038 | likely_pathogenic | 0.6428 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
P/F | 0.9104 | likely_pathogenic | 0.8635 | pathogenic | -1.089 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
P/G | 0.8458 | likely_pathogenic | 0.7979 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
P/H | 0.7155 | likely_pathogenic | 0.635 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.49300798 | None | None | N |
P/I | 0.5994 | likely_pathogenic | 0.512 | ambiguous | -0.664 | Destabilizing | 0.995 | D | 0.628 | neutral | None | None | None | None | N |
P/K | 0.7908 | likely_pathogenic | 0.7182 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | N |
P/L | 0.2649 | likely_benign | 0.2313 | benign | -0.664 | Destabilizing | 0.217 | N | 0.419 | neutral | N | 0.468242848 | None | None | N |
P/M | 0.6745 | likely_pathogenic | 0.5921 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
P/N | 0.9118 | likely_pathogenic | 0.8708 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
P/Q | 0.5857 | likely_pathogenic | 0.5096 | ambiguous | -0.822 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
P/R | 0.6142 | likely_pathogenic | 0.5472 | ambiguous | -0.179 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.486252606 | None | None | N |
P/S | 0.5485 | ambiguous | 0.4797 | ambiguous | -0.954 | Destabilizing | 0.999 | D | 0.513 | neutral | N | 0.494853447 | None | None | N |
P/T | 0.3962 | ambiguous | 0.3335 | benign | -0.951 | Destabilizing | 0.998 | D | 0.507 | neutral | N | 0.520981255 | None | None | N |
P/V | 0.4415 | ambiguous | 0.3738 | ambiguous | -0.75 | Destabilizing | 0.983 | D | 0.475 | neutral | None | None | None | None | N |
P/W | 0.9444 | likely_pathogenic | 0.9215 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
P/Y | 0.9002 | likely_pathogenic | 0.8544 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.