Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34439 | 103540;103541;103542 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
N2AB | 32798 | 98617;98618;98619 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
N2A | 31871 | 95836;95837;95838 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
N2B | 25374 | 76345;76346;76347 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
Novex-1 | 25499 | 76720;76721;76722 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
Novex-2 | 25566 | 76921;76922;76923 | chr2:178533300;178533299;178533298 | chr2:179398027;179398026;179398025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.816 | 0.568 | 0.660119374745 | gnomAD-4.0.0 | 6.84158E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99405E-07 | 0 | 0 |
T/S | None | None | 0.999 | N | 0.635 | 0.352 | 0.349870743963 | gnomAD-4.0.0 | 6.84158E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1983 | likely_benign | 0.1519 | benign | -0.649 | Destabilizing | 0.999 | D | 0.627 | neutral | D | 0.5283658 | None | None | I |
T/C | 0.7362 | likely_pathogenic | 0.6379 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
T/D | 0.8373 | likely_pathogenic | 0.7454 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
T/E | 0.5872 | likely_pathogenic | 0.5035 | ambiguous | -1.414 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
T/F | 0.6436 | likely_pathogenic | 0.5088 | ambiguous | -0.986 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
T/G | 0.6379 | likely_pathogenic | 0.5257 | ambiguous | -0.874 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
T/H | 0.5839 | likely_pathogenic | 0.4633 | ambiguous | -1.303 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
T/I | 0.4531 | ambiguous | 0.3435 | ambiguous | -0.142 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.489534806 | None | None | I |
T/K | 0.4782 | ambiguous | 0.3772 | ambiguous | -0.718 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
T/L | 0.3464 | ambiguous | 0.2508 | benign | -0.142 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/M | 0.2018 | likely_benign | 0.1509 | benign | 0.272 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
T/N | 0.4248 | ambiguous | 0.3149 | benign | -0.93 | Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.535254487 | None | None | I |
T/P | 0.9265 | likely_pathogenic | 0.8989 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.534137107 | None | None | I |
T/Q | 0.4067 | ambiguous | 0.3268 | benign | -1.229 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
T/R | 0.4108 | ambiguous | 0.3271 | benign | -0.414 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
T/S | 0.2213 | likely_benign | 0.1621 | benign | -0.997 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.483940233 | None | None | I |
T/V | 0.2964 | likely_benign | 0.2224 | benign | -0.281 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
T/W | 0.898 | likely_pathogenic | 0.8512 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
T/Y | 0.7146 | likely_pathogenic | 0.6049 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.