Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34442 | 103549;103550;103551 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
N2AB | 32801 | 98626;98627;98628 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
N2A | 31874 | 95845;95846;95847 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
N2B | 25377 | 76354;76355;76356 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
Novex-1 | 25502 | 76729;76730;76731 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
Novex-2 | 25569 | 76930;76931;76932 | chr2:178533291;178533290;178533289 | chr2:179398018;179398017;179398016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs745548644 | -0.039 | 1.0 | N | 0.659 | 0.419 | 0.541376754579 | gnomAD-2.1.1 | 2.81E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.28743E-04 | None | 0 | 0 | 0 |
A/V | rs745548644 | -0.039 | 1.0 | N | 0.659 | 0.419 | 0.541376754579 | gnomAD-4.0.0 | 1.09465E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.8549E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8348 | likely_pathogenic | 0.7954 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/D | 0.9412 | likely_pathogenic | 0.9111 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.513221695 | None | None | I |
A/E | 0.8818 | likely_pathogenic | 0.8031 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
A/F | 0.7613 | likely_pathogenic | 0.6674 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
A/G | 0.6226 | likely_pathogenic | 0.5496 | ambiguous | -0.22 | Destabilizing | 1.0 | D | 0.591 | neutral | D | 0.531520749 | None | None | I |
A/H | 0.878 | likely_pathogenic | 0.8356 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
A/I | 0.771 | likely_pathogenic | 0.6288 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
A/K | 0.9516 | likely_pathogenic | 0.9048 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/L | 0.6679 | likely_pathogenic | 0.5667 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
A/M | 0.7175 | likely_pathogenic | 0.5741 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
A/N | 0.8603 | likely_pathogenic | 0.8081 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
A/P | 0.9759 | likely_pathogenic | 0.9746 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.53132595 | None | None | I |
A/Q | 0.8396 | likely_pathogenic | 0.7624 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
A/R | 0.8935 | likely_pathogenic | 0.8224 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
A/S | 0.2345 | likely_benign | 0.2018 | benign | -0.419 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.51986096 | None | None | I |
A/T | 0.4569 | ambiguous | 0.3234 | benign | -0.503 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.498405442 | None | None | I |
A/V | 0.428 | ambiguous | 0.289 | benign | -0.3 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.473221807 | None | None | I |
A/W | 0.9726 | likely_pathogenic | 0.9587 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
A/Y | 0.8878 | likely_pathogenic | 0.845 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.