Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34445 | 103558;103559;103560 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
N2AB | 32804 | 98635;98636;98637 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
N2A | 31877 | 95854;95855;95856 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
N2B | 25380 | 76363;76364;76365 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
Novex-1 | 25505 | 76738;76739;76740 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
Novex-2 | 25572 | 76939;76940;76941 | chr2:178533282;178533281;178533280 | chr2:179398009;179398008;179398007 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs778587344 | -0.336 | 0.062 | N | 0.435 | 0.226 | 0.284539287134 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/I | rs778587344 | -0.336 | 0.062 | N | 0.435 | 0.226 | 0.284539287134 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
T/I | rs778587344 | -0.336 | 0.062 | N | 0.435 | 0.226 | 0.284539287134 | gnomAD-4.0.0 | 3.04481E-06 | None | None | None | None | I | None | 0 | 6.14931E-05 | None | 0 | 0 | None | 0 | 0 | 1.20492E-06 | 0 | 3.40229E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1206 | likely_benign | 0.0882 | benign | -1.035 | Destabilizing | 0.001 | N | 0.098 | neutral | N | 0.370419939 | None | None | I |
T/C | 0.7005 | likely_pathogenic | 0.5702 | pathogenic | -0.564 | Destabilizing | 0.824 | D | 0.463 | neutral | None | None | None | None | I |
T/D | 0.9133 | likely_pathogenic | 0.8949 | pathogenic | 0.335 | Stabilizing | 0.081 | N | 0.443 | neutral | None | None | None | None | I |
T/E | 0.9008 | likely_pathogenic | 0.8877 | pathogenic | 0.318 | Stabilizing | 0.081 | N | 0.433 | neutral | None | None | None | None | I |
T/F | 0.796 | likely_pathogenic | 0.7348 | pathogenic | -1.327 | Destabilizing | 0.555 | D | 0.574 | neutral | None | None | None | None | I |
T/G | 0.6498 | likely_pathogenic | 0.568 | pathogenic | -1.241 | Destabilizing | 0.035 | N | 0.495 | neutral | None | None | None | None | I |
T/H | 0.8169 | likely_pathogenic | 0.7865 | pathogenic | -1.501 | Destabilizing | 0.824 | D | 0.542 | neutral | None | None | None | None | I |
T/I | 0.5934 | likely_pathogenic | 0.4845 | ambiguous | -0.583 | Destabilizing | 0.062 | N | 0.435 | neutral | N | 0.452019815 | None | None | I |
T/K | 0.8814 | likely_pathogenic | 0.8687 | pathogenic | -0.475 | Destabilizing | 0.081 | N | 0.459 | neutral | None | None | None | None | I |
T/L | 0.4517 | ambiguous | 0.367 | ambiguous | -0.583 | Destabilizing | 0.035 | N | 0.415 | neutral | None | None | None | None | I |
T/M | 0.3367 | likely_benign | 0.2589 | benign | -0.27 | Destabilizing | 0.555 | D | 0.471 | neutral | None | None | None | None | I |
T/N | 0.5119 | ambiguous | 0.4569 | ambiguous | -0.356 | Destabilizing | 0.062 | N | 0.443 | neutral | N | 0.508334458 | None | None | I |
T/P | 0.8924 | likely_pathogenic | 0.8852 | pathogenic | -0.704 | Destabilizing | 0.317 | N | 0.455 | neutral | N | 0.484073395 | None | None | I |
T/Q | 0.7758 | likely_pathogenic | 0.7481 | pathogenic | -0.538 | Destabilizing | 0.38 | N | 0.475 | neutral | None | None | None | None | I |
T/R | 0.8283 | likely_pathogenic | 0.8017 | pathogenic | -0.285 | Destabilizing | 0.38 | N | 0.459 | neutral | None | None | None | None | I |
T/S | 0.1906 | likely_benign | 0.1814 | benign | -0.747 | Destabilizing | None | N | 0.17 | neutral | N | 0.467506556 | None | None | I |
T/V | 0.3542 | ambiguous | 0.2551 | benign | -0.704 | Destabilizing | 0.002 | N | 0.161 | neutral | None | None | None | None | I |
T/W | 0.971 | likely_pathogenic | 0.9665 | pathogenic | -1.188 | Destabilizing | 0.935 | D | 0.592 | neutral | None | None | None | None | I |
T/Y | 0.8554 | likely_pathogenic | 0.8236 | pathogenic | -0.956 | Destabilizing | 0.555 | D | 0.565 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.