Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34448 | 103567;103568;103569 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
N2AB | 32807 | 98644;98645;98646 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
N2A | 31880 | 95863;95864;95865 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
N2B | 25383 | 76372;76373;76374 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
Novex-1 | 25508 | 76747;76748;76749 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
Novex-2 | 25575 | 76948;76949;76950 | chr2:178533273;178533272;178533271 | chr2:179398000;179397999;179397998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.98 | N | 0.627 | 0.379 | 0.21279746466 | gnomAD-4.0.0 | 2.73658E-06 | None | None | None | None | N | None | 2.98704E-05 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 0 | 0 | 3.31268E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.6306 | likely_pathogenic | 0.6169 | pathogenic | -0.574 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | N |
Q/C | 0.9758 | likely_pathogenic | 0.9679 | pathogenic | 0.053 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Q/D | 0.9643 | likely_pathogenic | 0.9446 | pathogenic | 0.025 | Stabilizing | 0.993 | D | 0.612 | neutral | None | None | None | None | N |
Q/E | 0.2983 | likely_benign | 0.294 | benign | 0.065 | Stabilizing | 0.953 | D | 0.519 | neutral | N | 0.410343764 | None | None | N |
Q/F | 0.9659 | likely_pathogenic | 0.9474 | pathogenic | -0.431 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
Q/G | 0.8911 | likely_pathogenic | 0.8716 | pathogenic | -0.861 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
Q/H | 0.8164 | likely_pathogenic | 0.746 | pathogenic | -0.619 | Destabilizing | 0.265 | N | 0.343 | neutral | N | 0.468720064 | None | None | N |
Q/I | 0.8188 | likely_pathogenic | 0.7924 | pathogenic | 0.126 | Stabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
Q/K | 0.5333 | ambiguous | 0.512 | ambiguous | -0.138 | Destabilizing | 0.99 | D | 0.604 | neutral | N | 0.443242829 | None | None | N |
Q/L | 0.6436 | likely_pathogenic | 0.6089 | pathogenic | 0.126 | Stabilizing | 0.99 | D | 0.721 | prob.delet. | N | 0.501043126 | None | None | N |
Q/M | 0.7098 | likely_pathogenic | 0.6893 | pathogenic | 0.438 | Stabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
Q/N | 0.8512 | likely_pathogenic | 0.8013 | pathogenic | -0.542 | Destabilizing | 0.985 | D | 0.624 | neutral | None | None | None | None | N |
Q/P | 0.9645 | likely_pathogenic | 0.9395 | pathogenic | -0.077 | Destabilizing | 0.999 | D | 0.745 | deleterious | N | 0.490615489 | None | None | N |
Q/R | 0.56 | ambiguous | 0.5192 | ambiguous | -0.012 | Destabilizing | 0.98 | D | 0.627 | neutral | N | 0.447112641 | None | None | N |
Q/S | 0.6284 | likely_pathogenic | 0.598 | pathogenic | -0.641 | Destabilizing | 0.993 | D | 0.594 | neutral | None | None | None | None | N |
Q/T | 0.5805 | likely_pathogenic | 0.5506 | ambiguous | -0.413 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
Q/V | 0.6929 | likely_pathogenic | 0.669 | pathogenic | -0.077 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Q/W | 0.9768 | likely_pathogenic | 0.96 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Q/Y | 0.9565 | likely_pathogenic | 0.9268 | pathogenic | -0.092 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.