Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34451 | 103576;103577;103578 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
N2AB | 32810 | 98653;98654;98655 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
N2A | 31883 | 95872;95873;95874 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
N2B | 25386 | 76381;76382;76383 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
Novex-1 | 25511 | 76756;76757;76758 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
Novex-2 | 25578 | 76957;76958;76959 | chr2:178533264;178533263;178533262 | chr2:179397991;179397990;179397989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1559023612 | None | 0.928 | D | 0.651 | 0.687 | 0.562392168299 | gnomAD-4.0.0 | 1.59093E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85762E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9925 | likely_pathogenic | 0.9912 | pathogenic | -3.054 | Highly Destabilizing | 0.895 | D | 0.741 | deleterious | None | None | None | None | N |
L/C | 0.9837 | likely_pathogenic | 0.9816 | pathogenic | -2.502 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.81 | Highly Destabilizing | 0.983 | D | 0.905 | deleterious | None | None | None | None | N |
L/E | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -3.549 | Highly Destabilizing | 0.983 | D | 0.913 | deleterious | None | None | None | None | N |
L/F | 0.9335 | likely_pathogenic | 0.9269 | pathogenic | -1.845 | Destabilizing | 0.997 | D | 0.837 | deleterious | None | None | None | None | N |
L/G | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -3.62 | Highly Destabilizing | 0.983 | D | 0.908 | deleterious | None | None | None | None | N |
L/H | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -3.154 | Highly Destabilizing | 0.999 | D | 0.91 | deleterious | None | None | None | None | N |
L/I | 0.4653 | ambiguous | 0.4276 | ambiguous | -1.369 | Destabilizing | 0.963 | D | 0.652 | neutral | D | 0.565118671 | None | None | N |
L/K | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -2.499 | Highly Destabilizing | 0.983 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.7557 | likely_pathogenic | 0.73 | pathogenic | -1.408 | Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
L/N | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -3.037 | Highly Destabilizing | 0.992 | D | 0.913 | deleterious | None | None | None | None | N |
L/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.919 | Destabilizing | 0.085 | N | 0.667 | neutral | D | 0.644931514 | None | None | N |
L/Q | 0.9971 | likely_pathogenic | 0.9969 | pathogenic | -2.819 | Highly Destabilizing | 0.989 | D | 0.908 | deleterious | D | 0.644931514 | None | None | N |
L/R | 0.9944 | likely_pathogenic | 0.9946 | pathogenic | -2.218 | Highly Destabilizing | 0.989 | D | 0.899 | deleterious | D | 0.644931514 | None | None | N |
L/S | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.655 | Highly Destabilizing | 0.983 | D | 0.884 | deleterious | None | None | None | None | N |
L/T | 0.9948 | likely_pathogenic | 0.9939 | pathogenic | -3.25 | Highly Destabilizing | 0.983 | D | 0.836 | deleterious | None | None | None | None | N |
L/V | 0.6106 | likely_pathogenic | 0.5696 | pathogenic | -1.919 | Destabilizing | 0.928 | D | 0.651 | neutral | D | 0.541398592 | None | None | N |
L/W | 0.9957 | likely_pathogenic | 0.9958 | pathogenic | -2.357 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
L/Y | 0.9956 | likely_pathogenic | 0.9955 | pathogenic | -2.165 | Highly Destabilizing | 0.997 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.