Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34453 | 103582;103583;103584 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
N2AB | 32812 | 98659;98660;98661 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
N2A | 31885 | 95878;95879;95880 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
N2B | 25388 | 76387;76388;76389 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
Novex-1 | 25513 | 76762;76763;76764 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
Novex-2 | 25580 | 76963;76964;76965 | chr2:178533258;178533257;178533256 | chr2:179397985;179397984;179397983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 1.0 | D | 0.897 | 0.735 | 0.758961761621 | gnomAD-4.0.0 | 1.59092E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85765E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9098 | likely_pathogenic | 0.8898 | pathogenic | -1.563 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.627572757 | None | None | N |
V/C | 0.9896 | likely_pathogenic | 0.9884 | pathogenic | -1.575 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/D | 0.9964 | likely_pathogenic | 0.9964 | pathogenic | -2.962 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/E | 0.9883 | likely_pathogenic | 0.9884 | pathogenic | -2.934 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.628178169 | None | None | N |
V/F | 0.9841 | likely_pathogenic | 0.983 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
V/G | 0.9073 | likely_pathogenic | 0.9075 | pathogenic | -1.874 | Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.628178169 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.3324 | likely_benign | 0.3002 | benign | -0.776 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
V/K | 0.9924 | likely_pathogenic | 0.9915 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/L | 0.9667 | likely_pathogenic | 0.9611 | pathogenic | -0.776 | Destabilizing | 0.997 | D | 0.782 | deleterious | D | 0.593283827 | None | None | N |
V/M | 0.9579 | likely_pathogenic | 0.9529 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.595503674 | None | None | N |
V/N | 0.9904 | likely_pathogenic | 0.9892 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9906 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/Q | 0.9935 | likely_pathogenic | 0.993 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/R | 0.9869 | likely_pathogenic | 0.9864 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/S | 0.9691 | likely_pathogenic | 0.9645 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/T | 0.8846 | likely_pathogenic | 0.8663 | pathogenic | -1.75 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/Y | 0.998 | likely_pathogenic | 0.998 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.