Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34960 | 105103;105104;105105 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
N2AB | 33319 | 100180;100181;100182 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
N2A | 32392 | 97399;97400;97401 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
N2B | 25895 | 77908;77909;77910 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
Novex-1 | 26020 | 78283;78284;78285 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
Novex-2 | 26087 | 78484;78485;78486 | chr2:178531737;178531736;178531735 | chr2:179396464;179396463;179396462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs772702110 | -0.396 | 0.005 | N | 0.477 | 0.061 | 0.247872288689 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 2.66E-05 | 0 |
R/C | rs772702110 | -0.396 | 0.005 | N | 0.477 | 0.061 | 0.247872288689 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30907E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs772702110 | -0.396 | 0.005 | N | 0.477 | 0.061 | 0.247872288689 | gnomAD-4.0.0 | 2.16881E-05 | None | None | None | None | N | None | 0 | 6.66689E-05 | None | 0 | 0 | None | 0 | 0 | 2.45791E-05 | 2.19582E-05 | 0 |
R/H | rs1352552140 | None | 0.005 | N | 0.428 | 0.085 | 0.0920862733494 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs1352552140 | None | 0.005 | N | 0.428 | 0.085 | 0.0920862733494 | gnomAD-4.0.0 | 3.0983E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56255E-05 | 0 | 3.39023E-06 | 0 | 0 |
R/P | rs1352552140 | None | 0.705 | N | 0.561 | 0.251 | 0.303781844768 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/P | rs1352552140 | None | 0.705 | N | 0.561 | 0.251 | 0.303781844768 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47037E-05 | 0 | 0 |
R/S | rs772702110 | None | 0.251 | N | 0.505 | 0.104 | 0.0954503805726 | gnomAD-4.0.0 | 6.84141E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99399E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5365 | ambiguous | 0.8709 | pathogenic | -0.536 | Destabilizing | 0.035 | N | 0.517 | neutral | None | None | None | None | N |
R/C | 0.128 | likely_benign | 0.3693 | ambiguous | -0.509 | Destabilizing | 0.005 | N | 0.477 | neutral | N | 0.50034604 | None | None | N |
R/D | 0.83 | likely_pathogenic | 0.9675 | pathogenic | 0.008 | Stabilizing | 0.38 | N | 0.551 | neutral | None | None | None | None | N |
R/E | 0.6024 | likely_pathogenic | 0.8741 | pathogenic | 0.124 | Stabilizing | 0.081 | N | 0.552 | neutral | None | None | None | None | N |
R/F | 0.6468 | likely_pathogenic | 0.9292 | pathogenic | -0.425 | Destabilizing | 0.38 | N | 0.568 | neutral | None | None | None | None | N |
R/G | 0.4696 | ambiguous | 0.8361 | pathogenic | -0.832 | Destabilizing | 0.251 | N | 0.519 | neutral | N | 0.513909983 | None | None | N |
R/H | 0.0993 | likely_benign | 0.2248 | benign | -1.203 | Destabilizing | 0.005 | N | 0.428 | neutral | N | 0.462481085 | None | None | N |
R/I | 0.4258 | ambiguous | 0.8048 | pathogenic | 0.248 | Stabilizing | 0.38 | N | 0.574 | neutral | None | None | None | None | N |
R/K | 0.1793 | likely_benign | 0.2975 | benign | -0.581 | Destabilizing | 0.001 | N | 0.346 | neutral | None | None | None | None | N |
R/L | 0.3458 | ambiguous | 0.724 | pathogenic | 0.248 | Stabilizing | 0.144 | N | 0.518 | neutral | N | 0.442855175 | None | None | N |
R/M | 0.5379 | ambiguous | 0.8619 | pathogenic | -0.135 | Destabilizing | 0.935 | D | 0.538 | neutral | None | None | None | None | N |
R/N | 0.6185 | likely_pathogenic | 0.9043 | pathogenic | -0.104 | Destabilizing | 0.081 | N | 0.529 | neutral | None | None | None | None | N |
R/P | 0.9519 | likely_pathogenic | 0.9873 | pathogenic | 0.009 | Stabilizing | 0.705 | D | 0.561 | neutral | N | 0.46920124 | None | None | N |
R/Q | 0.1399 | likely_benign | 0.2977 | benign | -0.245 | Destabilizing | 0.38 | N | 0.572 | neutral | None | None | None | None | N |
R/S | 0.5142 | ambiguous | 0.8594 | pathogenic | -0.769 | Destabilizing | 0.251 | N | 0.505 | neutral | N | 0.447684991 | None | None | N |
R/T | 0.3547 | ambiguous | 0.745 | pathogenic | -0.478 | Destabilizing | 0.149 | N | 0.494 | neutral | None | None | None | None | N |
R/V | 0.4488 | ambiguous | 0.7877 | pathogenic | 0.009 | Stabilizing | 0.235 | N | 0.565 | neutral | None | None | None | None | N |
R/W | 0.3185 | likely_benign | 0.6698 | pathogenic | -0.17 | Destabilizing | 0.935 | D | 0.608 | neutral | None | None | None | None | N |
R/Y | 0.4037 | ambiguous | 0.781 | pathogenic | 0.145 | Stabilizing | 0.235 | N | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.