Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34962 | 105109;105110;105111 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
N2AB | 33321 | 100186;100187;100188 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
N2A | 32394 | 97405;97406;97407 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
N2B | 25897 | 77914;77915;77916 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
Novex-1 | 26022 | 78289;78290;78291 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
Novex-2 | 26089 | 78490;78491;78492 | chr2:178531731;178531730;178531729 | chr2:179396458;179396457;179396456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs746239963 | -1.103 | 0.988 | N | 0.589 | 0.439 | 0.778651688032 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
I/N | rs746239963 | -1.103 | 0.988 | N | 0.589 | 0.439 | 0.778651688032 | gnomAD-4.0.0 | 2.05242E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8483 | likely_pathogenic | 0.9417 | pathogenic | -2.321 | Highly Destabilizing | 0.863 | D | 0.449 | neutral | None | None | None | None | I |
I/C | 0.9437 | likely_pathogenic | 0.9786 | pathogenic | -1.316 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | I |
I/D | 0.9833 | likely_pathogenic | 0.9941 | pathogenic | -2.258 | Highly Destabilizing | 0.969 | D | 0.582 | neutral | None | None | None | None | I |
I/E | 0.9665 | likely_pathogenic | 0.9879 | pathogenic | -2.14 | Highly Destabilizing | 0.969 | D | 0.578 | neutral | None | None | None | None | I |
I/F | 0.4495 | ambiguous | 0.638 | pathogenic | -1.403 | Destabilizing | 0.996 | D | 0.482 | neutral | N | 0.427084085 | None | None | I |
I/G | 0.9716 | likely_pathogenic | 0.9891 | pathogenic | -2.763 | Highly Destabilizing | 0.969 | D | 0.532 | neutral | None | None | None | None | I |
I/H | 0.884 | likely_pathogenic | 0.9511 | pathogenic | -2.07 | Highly Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | I |
I/K | 0.9247 | likely_pathogenic | 0.9693 | pathogenic | -1.712 | Destabilizing | 0.939 | D | 0.582 | neutral | None | None | None | None | I |
I/L | 0.2744 | likely_benign | 0.3988 | ambiguous | -1.094 | Destabilizing | 0.675 | D | 0.39 | neutral | N | 0.421176833 | None | None | I |
I/M | 0.3251 | likely_benign | 0.493 | ambiguous | -0.823 | Destabilizing | 0.996 | D | 0.497 | neutral | N | 0.43048975 | None | None | I |
I/N | 0.8264 | likely_pathogenic | 0.9297 | pathogenic | -1.703 | Destabilizing | 0.988 | D | 0.589 | neutral | N | 0.428236092 | None | None | I |
I/P | 0.9817 | likely_pathogenic | 0.9891 | pathogenic | -1.48 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | I |
I/Q | 0.8889 | likely_pathogenic | 0.9503 | pathogenic | -1.75 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | I |
I/R | 0.8524 | likely_pathogenic | 0.9375 | pathogenic | -1.197 | Destabilizing | 0.991 | D | 0.594 | neutral | None | None | None | None | I |
I/S | 0.753 | likely_pathogenic | 0.8896 | pathogenic | -2.358 | Highly Destabilizing | 0.852 | D | 0.483 | neutral | N | 0.38854434 | None | None | I |
I/T | 0.6308 | likely_pathogenic | 0.8431 | pathogenic | -2.126 | Highly Destabilizing | 0.021 | N | 0.329 | neutral | N | 0.324455576 | None | None | I |
I/V | 0.2081 | likely_benign | 0.3567 | ambiguous | -1.48 | Destabilizing | 0.675 | D | 0.388 | neutral | N | 0.433644698 | None | None | I |
I/W | 0.9616 | likely_pathogenic | 0.9792 | pathogenic | -1.684 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
I/Y | 0.8509 | likely_pathogenic | 0.9128 | pathogenic | -1.455 | Destabilizing | 0.997 | D | 0.552 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.