Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34970 | 105133;105134;105135 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
N2AB | 33329 | 100210;100211;100212 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
N2A | 32402 | 97429;97430;97431 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
N2B | 25905 | 77938;77939;77940 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
Novex-1 | 26030 | 78313;78314;78315 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
Novex-2 | 26097 | 78514;78515;78516 | chr2:178531707;178531706;178531705 | chr2:179396434;179396433;179396432 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.061 | N | 0.131 | 0.119 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | None | None | 0.988 | N | 0.457 | 0.302 | 0.478376075226 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/S | None | None | 0.704 | N | 0.431 | 0.132 | 0.207176502487 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0774 | likely_benign | 0.1195 | benign | -0.256 | Destabilizing | 0.061 | N | 0.131 | neutral | N | 0.46046594 | None | None | N |
T/C | 0.6804 | likely_pathogenic | 0.8141 | pathogenic | -0.229 | Destabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | N |
T/D | 0.4439 | ambiguous | 0.6432 | pathogenic | 0.03 | Stabilizing | 0.884 | D | 0.419 | neutral | None | None | None | None | N |
T/E | 0.3123 | likely_benign | 0.5011 | ambiguous | -0.063 | Destabilizing | 0.079 | N | 0.198 | neutral | None | None | None | None | N |
T/F | 0.3817 | ambiguous | 0.6218 | pathogenic | -0.847 | Destabilizing | 0.997 | D | 0.55 | neutral | None | None | None | None | N |
T/G | 0.33 | likely_benign | 0.4348 | ambiguous | -0.346 | Destabilizing | 0.939 | D | 0.497 | neutral | None | None | None | None | N |
T/H | 0.3816 | ambiguous | 0.5833 | pathogenic | -0.64 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
T/I | 0.2333 | likely_benign | 0.5056 | ambiguous | -0.142 | Destabilizing | 0.988 | D | 0.457 | neutral | N | 0.495253304 | None | None | N |
T/K | 0.3005 | likely_benign | 0.5175 | ambiguous | -0.324 | Destabilizing | 0.939 | D | 0.441 | neutral | None | None | None | None | N |
T/L | 0.1288 | likely_benign | 0.2428 | benign | -0.142 | Destabilizing | 0.939 | D | 0.437 | neutral | None | None | None | None | N |
T/M | 0.1073 | likely_benign | 0.1763 | benign | 0.017 | Stabilizing | 0.999 | D | 0.451 | neutral | None | None | None | None | N |
T/N | 0.1756 | likely_benign | 0.3086 | benign | -0.083 | Destabilizing | 0.959 | D | 0.397 | neutral | N | 0.521861116 | None | None | N |
T/P | 0.1662 | likely_benign | 0.2673 | benign | -0.153 | Destabilizing | 0.988 | D | 0.452 | neutral | N | 0.464140964 | None | None | N |
T/Q | 0.2723 | likely_benign | 0.4627 | ambiguous | -0.334 | Destabilizing | 0.982 | D | 0.448 | neutral | None | None | None | None | N |
T/R | 0.2582 | likely_benign | 0.4639 | ambiguous | -0.045 | Destabilizing | 0.982 | D | 0.448 | neutral | None | None | None | None | N |
T/S | 0.127 | likely_benign | 0.215 | benign | -0.251 | Destabilizing | 0.704 | D | 0.431 | neutral | N | 0.490268772 | None | None | N |
T/V | 0.1518 | likely_benign | 0.2921 | benign | -0.153 | Destabilizing | 0.939 | D | 0.367 | neutral | None | None | None | None | N |
T/W | 0.7825 | likely_pathogenic | 0.9003 | pathogenic | -0.887 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.4709 | ambiguous | 0.6727 | pathogenic | -0.587 | Destabilizing | 0.997 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.