Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34977 | 105154;105155;105156 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
N2AB | 33336 | 100231;100232;100233 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
N2A | 32409 | 97450;97451;97452 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
N2B | 25912 | 77959;77960;77961 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
Novex-1 | 26037 | 78334;78335;78336 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
Novex-2 | 26104 | 78535;78536;78537 | chr2:178531686;178531685;178531684 | chr2:179396413;179396412;179396411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 1.0 | N | 0.673 | 0.379 | 0.162503812791 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85757E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9301 | likely_pathogenic | 0.9756 | pathogenic | -1.189 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
H/C | 0.4578 | ambiguous | 0.6328 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
H/D | 0.9507 | likely_pathogenic | 0.9824 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.49040614 | None | None | N |
H/E | 0.9315 | likely_pathogenic | 0.9771 | pathogenic | -0.387 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
H/F | 0.7901 | likely_pathogenic | 0.8883 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
H/G | 0.9542 | likely_pathogenic | 0.9843 | pathogenic | -1.556 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
H/I | 0.9176 | likely_pathogenic | 0.9722 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
H/K | 0.6507 | likely_pathogenic | 0.7996 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
H/L | 0.5673 | likely_pathogenic | 0.753 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.46499405 | None | None | N |
H/M | 0.9406 | likely_pathogenic | 0.9764 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
H/N | 0.6626 | likely_pathogenic | 0.8152 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.504597067 | None | None | N |
H/P | 0.9792 | likely_pathogenic | 0.9937 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.467528945 | None | None | N |
H/Q | 0.615 | likely_pathogenic | 0.8074 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.489899161 | None | None | N |
H/R | 0.2401 | likely_benign | 0.4137 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.662 | neutral | N | 0.475810168 | None | None | N |
H/S | 0.8837 | likely_pathogenic | 0.9534 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
H/T | 0.9555 | likely_pathogenic | 0.9874 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
H/V | 0.8812 | likely_pathogenic | 0.9546 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
H/W | 0.7481 | likely_pathogenic | 0.8649 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
H/Y | 0.3121 | likely_benign | 0.4816 | ambiguous | 0.417 | Stabilizing | 0.999 | D | 0.613 | neutral | N | 0.455412171 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.