Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34981 | 105166;105167;105168 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
N2AB | 33340 | 100243;100244;100245 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
N2A | 32413 | 97462;97463;97464 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
N2B | 25916 | 77971;77972;77973 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
Novex-1 | 26041 | 78346;78347;78348 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
Novex-2 | 26108 | 78547;78548;78549 | chr2:178531674;178531673;178531672 | chr2:179396401;179396400;179396399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.509 | N | 0.233 | 0.129 | 0.250579442822 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1853 | likely_benign | 0.2894 | benign | -0.712 | Destabilizing | 0.826 | D | 0.337 | neutral | N | 0.507393095 | None | None | N |
E/C | 0.9199 | likely_pathogenic | 0.9528 | pathogenic | -0.519 | Destabilizing | 0.999 | D | 0.516 | neutral | None | None | None | None | N |
E/D | 0.5505 | ambiguous | 0.6261 | pathogenic | -0.764 | Destabilizing | 0.92 | D | 0.315 | neutral | N | 0.490095414 | None | None | N |
E/F | 0.9309 | likely_pathogenic | 0.9638 | pathogenic | -0.01 | Destabilizing | 0.982 | D | 0.481 | neutral | None | None | None | None | N |
E/G | 0.575 | likely_pathogenic | 0.7071 | pathogenic | -1.037 | Destabilizing | 0.959 | D | 0.426 | neutral | N | 0.49138123 | None | None | N |
E/H | 0.8444 | likely_pathogenic | 0.9135 | pathogenic | 0.09 | Stabilizing | 0.991 | D | 0.372 | neutral | None | None | None | None | N |
E/I | 0.5194 | ambiguous | 0.6838 | pathogenic | 0.167 | Stabilizing | 0.964 | D | 0.463 | neutral | None | None | None | None | N |
E/K | 0.4224 | ambiguous | 0.6047 | pathogenic | -0.348 | Destabilizing | 0.852 | D | 0.314 | neutral | N | 0.510932046 | None | None | N |
E/L | 0.4795 | ambiguous | 0.6336 | pathogenic | 0.167 | Stabilizing | 0.046 | N | 0.343 | neutral | None | None | None | None | N |
E/M | 0.5439 | ambiguous | 0.6851 | pathogenic | 0.313 | Stabilizing | 0.982 | D | 0.461 | neutral | None | None | None | None | N |
E/N | 0.7068 | likely_pathogenic | 0.8156 | pathogenic | -0.948 | Destabilizing | 0.991 | D | 0.353 | neutral | None | None | None | None | N |
E/P | 0.4328 | ambiguous | 0.5769 | pathogenic | -0.106 | Destabilizing | 0.046 | N | 0.239 | neutral | None | None | None | None | N |
E/Q | 0.2531 | likely_benign | 0.3615 | ambiguous | -0.818 | Destabilizing | 0.509 | D | 0.233 | neutral | N | 0.520418321 | None | None | N |
E/R | 0.6346 | likely_pathogenic | 0.7737 | pathogenic | 0.1 | Stabilizing | 0.982 | D | 0.353 | neutral | None | None | None | None | N |
E/S | 0.468 | ambiguous | 0.6182 | pathogenic | -1.182 | Destabilizing | 0.884 | D | 0.276 | neutral | None | None | None | None | N |
E/T | 0.4827 | ambiguous | 0.639 | pathogenic | -0.907 | Destabilizing | 0.17 | N | 0.231 | neutral | None | None | None | None | N |
E/V | 0.3326 | likely_benign | 0.4796 | ambiguous | -0.106 | Destabilizing | 0.852 | D | 0.382 | neutral | N | 0.5102414 | None | None | N |
E/W | 0.9857 | likely_pathogenic | 0.9932 | pathogenic | 0.3 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
E/Y | 0.909 | likely_pathogenic | 0.9527 | pathogenic | 0.254 | Stabilizing | 0.997 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.