Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34997 | 105214;105215;105216 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
N2AB | 33356 | 100291;100292;100293 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
N2A | 32429 | 97510;97511;97512 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
N2B | 25932 | 78019;78020;78021 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
Novex-1 | 26057 | 78394;78395;78396 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
Novex-2 | 26124 | 78595;78596;78597 | chr2:178531626;178531625;178531624 | chr2:179396353;179396352;179396351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs771364302 | -1.498 | 0.117 | N | 0.502 | 0.041 | 0.271763555656 | gnomAD-2.1.1 | 7.13E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.02448E-03 | None | 0 | None | 0 | 0 | 0 |
L/V | rs771364302 | -1.498 | 0.117 | N | 0.502 | 0.041 | 0.271763555656 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92604E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs771364302 | -1.498 | 0.117 | N | 0.502 | 0.041 | 0.271763555656 | gnomAD-4.0.0 | 1.17729E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.23238E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7487 | likely_pathogenic | 0.8783 | pathogenic | -2.441 | Highly Destabilizing | 0.966 | D | 0.661 | neutral | None | None | None | None | N |
L/C | 0.8158 | likely_pathogenic | 0.9239 | pathogenic | -2.181 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/D | 0.9893 | likely_pathogenic | 0.9964 | pathogenic | -2.986 | Highly Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
L/E | 0.9397 | likely_pathogenic | 0.9781 | pathogenic | -2.783 | Highly Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.5215 | ambiguous | 0.8177 | pathogenic | -1.524 | Destabilizing | 0.997 | D | 0.839 | deleterious | N | 0.477506466 | None | None | N |
L/G | 0.962 | likely_pathogenic | 0.9826 | pathogenic | -2.972 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.8062 | likely_pathogenic | 0.9475 | pathogenic | -2.491 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | N | 0.444009968 | None | None | N |
L/I | 0.1963 | likely_benign | 0.3707 | ambiguous | -0.909 | Destabilizing | 0.955 | D | 0.652 | neutral | N | 0.491937201 | None | None | N |
L/K | 0.8893 | likely_pathogenic | 0.9657 | pathogenic | -1.822 | Destabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
L/M | 0.2364 | likely_benign | 0.3851 | ambiguous | -1.049 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
L/N | 0.9239 | likely_pathogenic | 0.9736 | pathogenic | -2.189 | Highly Destabilizing | 0.999 | D | 0.902 | deleterious | None | None | None | None | N |
L/P | 0.9946 | likely_pathogenic | 0.9979 | pathogenic | -1.4 | Destabilizing | 0.999 | D | 0.903 | deleterious | N | 0.456199093 | None | None | N |
L/Q | 0.7129 | likely_pathogenic | 0.8976 | pathogenic | -2.082 | Highly Destabilizing | 0.999 | D | 0.908 | deleterious | None | None | None | None | N |
L/R | 0.8189 | likely_pathogenic | 0.9433 | pathogenic | -1.543 | Destabilizing | 0.999 | D | 0.91 | deleterious | N | 0.491763842 | None | None | N |
L/S | 0.8593 | likely_pathogenic | 0.9583 | pathogenic | -2.878 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
L/T | 0.6872 | likely_pathogenic | 0.8783 | pathogenic | -2.526 | Highly Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
L/V | 0.2069 | likely_benign | 0.4024 | ambiguous | -1.4 | Destabilizing | 0.117 | N | 0.502 | neutral | N | 0.452648094 | None | None | N |
L/W | 0.8253 | likely_pathogenic | 0.9619 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/Y | 0.8378 | likely_pathogenic | 0.9575 | pathogenic | -1.654 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.