Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35007 | 105244;105245;105246 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
N2AB | 33366 | 100321;100322;100323 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
N2A | 32439 | 97540;97541;97542 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
N2B | 25942 | 78049;78050;78051 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
Novex-1 | 26067 | 78424;78425;78426 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
Novex-2 | 26134 | 78625;78626;78627 | chr2:178531596;178531595;178531594 | chr2:179396323;179396322;179396321 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.741 | N | 0.391 | 0.305 | 0.370051654043 | gnomAD-4.0.0 | 1.5909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0994 | likely_benign | 0.116 | benign | -0.121 | Destabilizing | 0.062 | N | 0.395 | neutral | N | 0.44058566 | None | None | N |
D/C | 0.5268 | ambiguous | 0.596 | pathogenic | 0.132 | Stabilizing | 0.935 | D | 0.458 | neutral | None | None | None | None | N |
D/E | 0.0708 | likely_benign | 0.0815 | benign | -0.165 | Destabilizing | None | N | 0.16 | neutral | N | 0.37164565 | None | None | N |
D/F | 0.5634 | ambiguous | 0.6511 | pathogenic | -0.25 | Destabilizing | 0.791 | D | 0.391 | neutral | None | None | None | None | N |
D/G | 0.1099 | likely_benign | 0.1321 | benign | -0.254 | Destabilizing | 0.117 | N | 0.389 | neutral | N | 0.503962348 | None | None | N |
D/H | 0.23 | likely_benign | 0.2785 | benign | 0.094 | Stabilizing | 0.484 | N | 0.328 | neutral | N | 0.461074165 | None | None | N |
D/I | 0.2819 | likely_benign | 0.3394 | benign | 0.166 | Stabilizing | 0.555 | D | 0.401 | neutral | None | None | None | None | N |
D/K | 0.1911 | likely_benign | 0.2378 | benign | 0.447 | Stabilizing | 0.081 | N | 0.37 | neutral | None | None | None | None | N |
D/L | 0.2902 | likely_benign | 0.3525 | ambiguous | 0.166 | Stabilizing | 0.38 | N | 0.381 | neutral | None | None | None | None | N |
D/M | 0.4349 | ambiguous | 0.5144 | ambiguous | 0.233 | Stabilizing | 0.935 | D | 0.386 | neutral | None | None | None | None | N |
D/N | 0.0864 | likely_benign | 0.0997 | benign | 0.311 | Stabilizing | 0.117 | N | 0.406 | neutral | N | 0.490955766 | None | None | N |
D/P | 0.5576 | ambiguous | 0.6347 | pathogenic | 0.09 | Stabilizing | 0.555 | D | 0.333 | neutral | None | None | None | None | N |
D/Q | 0.1826 | likely_benign | 0.2224 | benign | 0.307 | Stabilizing | 0.081 | N | 0.358 | neutral | None | None | None | None | N |
D/R | 0.2393 | likely_benign | 0.296 | benign | 0.577 | Stabilizing | 0.235 | N | 0.371 | neutral | None | None | None | None | N |
D/S | 0.0798 | likely_benign | 0.0894 | benign | 0.183 | Stabilizing | 0.081 | N | 0.377 | neutral | None | None | None | None | N |
D/T | 0.1452 | likely_benign | 0.1676 | benign | 0.284 | Stabilizing | 0.149 | N | 0.394 | neutral | None | None | None | None | N |
D/V | 0.1701 | likely_benign | 0.2005 | benign | 0.09 | Stabilizing | 0.317 | N | 0.398 | neutral | N | 0.511101751 | None | None | N |
D/W | 0.8037 | likely_pathogenic | 0.8606 | pathogenic | -0.197 | Destabilizing | 0.935 | D | 0.537 | neutral | None | None | None | None | N |
D/Y | 0.2646 | likely_benign | 0.3128 | benign | -0.028 | Destabilizing | 0.741 | D | 0.391 | neutral | N | 0.461327655 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.