Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35023 | 105292;105293;105294 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
N2AB | 33382 | 100369;100370;100371 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
N2A | 32455 | 97588;97589;97590 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
N2B | 25958 | 78097;78098;78099 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
Novex-1 | 26083 | 78472;78473;78474 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
Novex-2 | 26150 | 78673;78674;78675 | chr2:178531548;178531547;178531546 | chr2:179396275;179396274;179396273 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.885 | N | 0.565 | 0.266 | 0.490282680104 | gnomAD-4.0.0 | 2.05246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.994E-07 | 2.31868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7242 | likely_pathogenic | 0.7986 | pathogenic | -0.923 | Destabilizing | 0.252 | N | 0.483 | neutral | None | None | None | None | N |
A/D | 0.8265 | likely_pathogenic | 0.8834 | pathogenic | -1.077 | Destabilizing | 0.982 | D | 0.727 | prob.delet. | D | 0.525440138 | None | None | N |
A/E | 0.8279 | likely_pathogenic | 0.8762 | pathogenic | -1.185 | Destabilizing | 0.986 | D | 0.682 | prob.neutral | None | None | None | None | N |
A/F | 0.7763 | likely_pathogenic | 0.8442 | pathogenic | -1.169 | Destabilizing | 0.993 | D | 0.75 | deleterious | None | None | None | None | N |
A/G | 0.4152 | ambiguous | 0.5294 | ambiguous | -0.98 | Destabilizing | 0.939 | D | 0.572 | neutral | N | 0.51657583 | None | None | N |
A/H | 0.9107 | likely_pathogenic | 0.936 | pathogenic | -1.0 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/I | 0.6381 | likely_pathogenic | 0.79 | pathogenic | -0.577 | Destabilizing | 0.986 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/K | 0.946 | likely_pathogenic | 0.9571 | pathogenic | -1.115 | Destabilizing | 0.986 | D | 0.671 | neutral | None | None | None | None | N |
A/L | 0.6133 | likely_pathogenic | 0.7104 | pathogenic | -0.577 | Destabilizing | 0.91 | D | 0.602 | neutral | None | None | None | None | N |
A/M | 0.5705 | likely_pathogenic | 0.7067 | pathogenic | -0.449 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
A/N | 0.7281 | likely_pathogenic | 0.8087 | pathogenic | -0.771 | Destabilizing | 0.986 | D | 0.741 | deleterious | None | None | None | None | N |
A/P | 0.9929 | likely_pathogenic | 0.992 | pathogenic | -0.621 | Destabilizing | 0.991 | D | 0.727 | prob.delet. | D | 0.528350209 | None | None | N |
A/Q | 0.8232 | likely_pathogenic | 0.8519 | pathogenic | -1.06 | Destabilizing | 0.993 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/R | 0.9005 | likely_pathogenic | 0.9158 | pathogenic | -0.604 | Destabilizing | 0.993 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/S | 0.18 | likely_benign | 0.2396 | benign | -1.04 | Destabilizing | 0.885 | D | 0.565 | neutral | D | 0.535483774 | None | None | N |
A/T | 0.1929 | likely_benign | 0.3244 | benign | -1.069 | Destabilizing | 0.17 | N | 0.305 | neutral | N | 0.480689284 | None | None | N |
A/V | 0.3232 | likely_benign | 0.49 | ambiguous | -0.621 | Destabilizing | 0.885 | D | 0.565 | neutral | N | 0.516492581 | None | None | N |
A/W | 0.9792 | likely_pathogenic | 0.9836 | pathogenic | -1.351 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
A/Y | 0.8929 | likely_pathogenic | 0.9269 | pathogenic | -1.011 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.