Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35030 | 105313;105314;105315 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
N2AB | 33389 | 100390;100391;100392 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
N2A | 32462 | 97609;97610;97611 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
N2B | 25965 | 78118;78119;78120 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
Novex-1 | 26090 | 78493;78494;78495 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
Novex-2 | 26157 | 78694;78695;78696 | chr2:178531527;178531526;178531525 | chr2:179396254;179396253;179396252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs72629789 | -0.179 | 0.893 | N | 0.351 | 0.173 | 0.101711395817 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/E | rs72629789 | -0.179 | 0.893 | N | 0.351 | 0.173 | 0.101711395817 | gnomAD-4.0.0 | 6.84177E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
D/G | rs773386284 | -0.747 | 0.998 | N | 0.749 | 0.517 | 0.388334884743 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
D/G | rs773386284 | -0.747 | 0.998 | N | 0.749 | 0.517 | 0.388334884743 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/G | rs773386284 | -0.747 | 0.998 | N | 0.749 | 0.517 | 0.388334884743 | gnomAD-4.0.0 | 4.33747E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22717E-05 | None | 0 | 0 | 5.0853E-06 | 0 | 0 |
D/H | None | None | 1.0 | N | 0.731 | 0.433 | 0.392395365052 | gnomAD-4.0.0 | 6.84167E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99402E-07 | 0 | 0 |
D/N | rs1689108955 | None | 0.999 | N | 0.715 | 0.333 | 0.329540904979 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs1689108955 | None | 0.999 | N | 0.715 | 0.333 | 0.329540904979 | gnomAD-4.0.0 | 4.95718E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78037E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5378 | ambiguous | 0.6117 | pathogenic | -0.489 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.481801218 | None | None | N |
D/C | 0.9401 | likely_pathogenic | 0.962 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/E | 0.3937 | ambiguous | 0.4745 | ambiguous | -0.57 | Destabilizing | 0.893 | D | 0.351 | neutral | N | 0.434682061 | None | None | N |
D/F | 0.8768 | likely_pathogenic | 0.9182 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
D/G | 0.719 | likely_pathogenic | 0.7805 | pathogenic | -0.728 | Destabilizing | 0.998 | D | 0.749 | deleterious | N | 0.512990916 | None | None | N |
D/H | 0.666 | likely_pathogenic | 0.7509 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.493962438 | None | None | N |
D/I | 0.7705 | likely_pathogenic | 0.8339 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
D/K | 0.87 | likely_pathogenic | 0.9038 | pathogenic | 0.146 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/L | 0.7309 | likely_pathogenic | 0.7977 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
D/M | 0.8951 | likely_pathogenic | 0.9286 | pathogenic | 0.534 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
D/N | 0.3207 | likely_benign | 0.3957 | ambiguous | -0.126 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.457713637 | None | None | N |
D/P | 0.9917 | likely_pathogenic | 0.9931 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
D/Q | 0.749 | likely_pathogenic | 0.8036 | pathogenic | -0.106 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
D/R | 0.8406 | likely_pathogenic | 0.8845 | pathogenic | 0.091 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
D/S | 0.4043 | ambiguous | 0.4819 | ambiguous | -0.286 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/T | 0.6583 | likely_pathogenic | 0.7264 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
D/V | 0.5639 | ambiguous | 0.6455 | pathogenic | -0.069 | Destabilizing | 0.999 | D | 0.783 | deleterious | N | 0.426988085 | None | None | N |
D/W | 0.974 | likely_pathogenic | 0.9826 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
D/Y | 0.6011 | likely_pathogenic | 0.7002 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.494482513 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.