Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35130 | 105613;105614;105615 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
N2AB | 33489 | 100690;100691;100692 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
N2A | 32562 | 97909;97910;97911 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
N2B | 26065 | 78418;78419;78420 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
Novex-1 | 26190 | 78793;78794;78795 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
Novex-2 | 26257 | 78994;78995;78996 | chr2:178531227;178531226;178531225 | chr2:179395954;179395953;179395952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.005 | N | 0.139 | 0.065 | 0.3349148499 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.778 | likely_pathogenic | 0.7965 | pathogenic | -0.206 | Destabilizing | 0.525 | D | 0.307 | neutral | None | None | None | None | I |
R/C | 0.3971 | ambiguous | 0.4506 | ambiguous | -0.306 | Destabilizing | 0.998 | D | 0.355 | neutral | None | None | None | None | I |
R/D | 0.9304 | likely_pathogenic | 0.9399 | pathogenic | 0.055 | Stabilizing | 0.842 | D | 0.392 | neutral | None | None | None | None | I |
R/E | 0.6931 | likely_pathogenic | 0.7211 | pathogenic | 0.143 | Stabilizing | 0.525 | D | 0.297 | neutral | None | None | None | None | I |
R/F | 0.8932 | likely_pathogenic | 0.8915 | pathogenic | -0.31 | Destabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | I |
R/G | 0.6598 | likely_pathogenic | 0.7001 | pathogenic | -0.442 | Destabilizing | 0.801 | D | 0.377 | neutral | N | 0.483681775 | None | None | I |
R/H | 0.1977 | likely_benign | 0.2161 | benign | -0.877 | Destabilizing | 0.991 | D | 0.405 | neutral | None | None | None | None | I |
R/I | 0.6952 | likely_pathogenic | 0.6825 | pathogenic | 0.392 | Stabilizing | 0.934 | D | 0.378 | neutral | N | 0.484188754 | None | None | I |
R/K | 0.1898 | likely_benign | 0.1859 | benign | -0.201 | Destabilizing | 0.005 | N | 0.139 | neutral | N | 0.444629696 | None | None | I |
R/L | 0.6311 | likely_pathogenic | 0.6548 | pathogenic | 0.392 | Stabilizing | 0.728 | D | 0.362 | neutral | None | None | None | None | I |
R/M | 0.6863 | likely_pathogenic | 0.6874 | pathogenic | -0.046 | Destabilizing | 0.991 | D | 0.38 | neutral | None | None | None | None | I |
R/N | 0.8474 | likely_pathogenic | 0.8499 | pathogenic | 0.091 | Stabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | I |
R/P | 0.982 | likely_pathogenic | 0.9873 | pathogenic | 0.214 | Stabilizing | 0.974 | D | 0.382 | neutral | None | None | None | None | I |
R/Q | 0.1865 | likely_benign | 0.2121 | benign | -0.024 | Destabilizing | 0.842 | D | 0.368 | neutral | None | None | None | None | I |
R/S | 0.7925 | likely_pathogenic | 0.8148 | pathogenic | -0.415 | Destabilizing | 0.454 | N | 0.314 | neutral | N | 0.469912143 | None | None | I |
R/T | 0.5403 | ambiguous | 0.5454 | ambiguous | -0.172 | Destabilizing | 0.022 | N | 0.189 | neutral | N | 0.460735299 | None | None | I |
R/V | 0.7049 | likely_pathogenic | 0.7031 | pathogenic | 0.214 | Stabilizing | 0.728 | D | 0.386 | neutral | None | None | None | None | I |
R/W | 0.4927 | ambiguous | 0.5149 | ambiguous | -0.245 | Destabilizing | 0.998 | D | 0.377 | neutral | None | None | None | None | I |
R/Y | 0.772 | likely_pathogenic | 0.7669 | pathogenic | 0.138 | Stabilizing | 0.991 | D | 0.376 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.