Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35132 | 105619;105620;105621 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
N2AB | 33491 | 100696;100697;100698 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
N2A | 32564 | 97915;97916;97917 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
N2B | 26067 | 78424;78425;78426 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
Novex-1 | 26192 | 78799;78800;78801 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
Novex-2 | 26259 | 79000;79001;79002 | chr2:178531221;178531220;178531219 | chr2:179395948;179395947;179395946 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.996 | N | 0.441 | 0.105 | 0.422404719673 | gnomAD-4.0.0 | 6.8414E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99399E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.824 | likely_pathogenic | 0.8251 | pathogenic | -0.907 | Destabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
L/C | 0.9372 | likely_pathogenic | 0.9329 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/D | 0.9855 | likely_pathogenic | 0.9869 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/E | 0.9079 | likely_pathogenic | 0.9135 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/F | 0.5268 | ambiguous | 0.5475 | ambiguous | -0.926 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/G | 0.9574 | likely_pathogenic | 0.9599 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
L/H | 0.7885 | likely_pathogenic | 0.8186 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/I | 0.1994 | likely_benign | 0.1789 | benign | -0.552 | Destabilizing | 0.996 | D | 0.467 | neutral | N | 0.456131116 | None | None | N |
L/K | 0.7667 | likely_pathogenic | 0.7874 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
L/M | 0.3368 | likely_benign | 0.3295 | benign | -0.372 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/N | 0.9086 | likely_pathogenic | 0.9116 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/P | 0.9576 | likely_pathogenic | 0.9729 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.466469443 | None | None | N |
L/Q | 0.6505 | likely_pathogenic | 0.6832 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.499039318 | None | None | N |
L/R | 0.639 | likely_pathogenic | 0.6839 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.757 | deleterious | N | 0.476874535 | None | None | N |
L/S | 0.8877 | likely_pathogenic | 0.8909 | pathogenic | -0.671 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/T | 0.7487 | likely_pathogenic | 0.7375 | pathogenic | -0.662 | Destabilizing | 0.91 | D | 0.294 | neutral | None | None | None | None | N |
L/V | 0.2495 | likely_benign | 0.2267 | benign | -0.637 | Destabilizing | 0.996 | D | 0.441 | neutral | N | 0.430715383 | None | None | N |
L/W | 0.7864 | likely_pathogenic | 0.8248 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/Y | 0.8731 | likely_pathogenic | 0.8839 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.