Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35134 | 105625;105626;105627 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
N2AB | 33493 | 100702;100703;100704 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
N2A | 32566 | 97921;97922;97923 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
N2B | 26069 | 78430;78431;78432 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
Novex-1 | 26194 | 78805;78806;78807 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
Novex-2 | 26261 | 79006;79007;79008 | chr2:178531215;178531214;178531213 | chr2:179395942;179395941;179395940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs1394892060 | 0.223 | 0.999 | N | 0.69 | 0.528 | 0.458013479912 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 1.24039E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/M | rs1394892060 | 0.223 | 0.999 | N | 0.69 | 0.528 | 0.458013479912 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/M | rs1394892060 | 0.223 | 0.999 | N | 0.69 | 0.528 | 0.458013479912 | gnomAD-4.0.0 | 3.8425E-06 | None | None | None | None | I | None | 5.07408E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | None | None | 0.322 | D | 0.387 | 0.334 | 0.331365685468 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6894 | likely_pathogenic | 0.6697 | pathogenic | -0.246 | Destabilizing | 0.953 | D | 0.614 | neutral | None | None | None | None | I |
K/C | 0.9327 | likely_pathogenic | 0.9288 | pathogenic | -0.328 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/D | 0.9403 | likely_pathogenic | 0.939 | pathogenic | 0.126 | Stabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | I |
K/E | 0.5256 | ambiguous | 0.5205 | ambiguous | 0.176 | Stabilizing | 0.939 | D | 0.625 | neutral | N | 0.509105249 | None | None | I |
K/F | 0.9473 | likely_pathogenic | 0.9402 | pathogenic | -0.218 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | I |
K/G | 0.846 | likely_pathogenic | 0.8352 | pathogenic | -0.526 | Destabilizing | 0.976 | D | 0.629 | neutral | None | None | None | None | I |
K/H | 0.6362 | likely_pathogenic | 0.621 | pathogenic | -0.876 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | I |
K/I | 0.7373 | likely_pathogenic | 0.7171 | pathogenic | 0.437 | Stabilizing | 0.986 | D | 0.744 | deleterious | None | None | None | None | I |
K/L | 0.6595 | likely_pathogenic | 0.6416 | pathogenic | 0.437 | Stabilizing | 0.953 | D | 0.634 | neutral | None | None | None | None | I |
K/M | 0.5659 | likely_pathogenic | 0.5413 | ambiguous | 0.244 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.498547253 | None | None | I |
K/N | 0.8396 | likely_pathogenic | 0.828 | pathogenic | -0.006 | Destabilizing | 0.982 | D | 0.649 | neutral | N | 0.521997188 | None | None | I |
K/P | 0.7758 | likely_pathogenic | 0.7961 | pathogenic | 0.24 | Stabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/Q | 0.3069 | likely_benign | 0.2849 | benign | -0.143 | Destabilizing | 0.982 | D | 0.669 | neutral | N | 0.500120406 | None | None | I |
K/R | 0.1176 | likely_benign | 0.1099 | benign | -0.28 | Destabilizing | 0.1 | N | 0.345 | neutral | N | 0.486999181 | None | None | I |
K/S | 0.7893 | likely_pathogenic | 0.7726 | pathogenic | -0.586 | Destabilizing | 0.91 | D | 0.623 | neutral | None | None | None | None | I |
K/T | 0.5038 | ambiguous | 0.489 | ambiguous | -0.357 | Destabilizing | 0.322 | N | 0.387 | neutral | D | 0.524978779 | None | None | I |
K/V | 0.6782 | likely_pathogenic | 0.6511 | pathogenic | 0.24 | Stabilizing | 0.986 | D | 0.615 | neutral | None | None | None | None | I |
K/W | 0.9433 | likely_pathogenic | 0.9404 | pathogenic | -0.147 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/Y | 0.8741 | likely_pathogenic | 0.8607 | pathogenic | 0.173 | Stabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.