Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35144 | 105655;105656;105657 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
N2AB | 33503 | 100732;100733;100734 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
N2A | 32576 | 97951;97952;97953 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
N2B | 26079 | 78460;78461;78462 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
Novex-1 | 26204 | 78835;78836;78837 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
Novex-2 | 26271 | 79036;79037;79038 | chr2:178531185;178531184;178531183 | chr2:179395912;179395911;179395910 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs568472002 | 0.761 | 0.963 | N | 0.475 | 0.236 | 0.263612267334 | gnomAD-2.1.1 | 5.7E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 4.24809E-04 | None | 0 | 1.56E-05 | 0 |
E/K | rs568472002 | 0.761 | 0.963 | N | 0.475 | 0.236 | 0.263612267334 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14594E-04 | 0 |
E/K | rs568472002 | 0.761 | 0.963 | N | 0.475 | 0.236 | 0.263612267334 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs568472002 | 0.761 | 0.963 | N | 0.475 | 0.236 | 0.263612267334 | gnomAD-4.0.0 | 3.03598E-05 | None | None | None | None | N | None | 2.66581E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78033E-06 | 4.17225E-04 | 1.60031E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2589 | likely_benign | 0.336 | benign | -0.743 | Destabilizing | 0.822 | D | 0.526 | neutral | N | 0.494249574 | None | None | N |
E/C | 0.9376 | likely_pathogenic | 0.9559 | pathogenic | -0.18 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
E/D | 0.16 | likely_benign | 0.2002 | benign | -0.527 | Destabilizing | 0.006 | N | 0.195 | neutral | N | 0.431216816 | None | None | N |
E/F | 0.8524 | likely_pathogenic | 0.9022 | pathogenic | -0.415 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
E/G | 0.2643 | likely_benign | 0.3557 | ambiguous | -0.988 | Destabilizing | 0.822 | D | 0.559 | neutral | N | 0.468967127 | None | None | N |
E/H | 0.6662 | likely_pathogenic | 0.725 | pathogenic | -0.322 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
E/I | 0.6458 | likely_pathogenic | 0.7579 | pathogenic | -0.11 | Destabilizing | 0.978 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.2294 | likely_benign | 0.2772 | benign | 0.198 | Stabilizing | 0.963 | D | 0.475 | neutral | N | 0.477221251 | None | None | N |
E/L | 0.674 | likely_pathogenic | 0.7649 | pathogenic | -0.11 | Destabilizing | 0.978 | D | 0.75 | deleterious | None | None | None | None | N |
E/M | 0.6284 | likely_pathogenic | 0.7197 | pathogenic | 0.148 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/N | 0.3492 | ambiguous | 0.4149 | ambiguous | -0.333 | Destabilizing | 0.915 | D | 0.585 | neutral | None | None | None | None | N |
E/P | 0.9556 | likely_pathogenic | 0.9722 | pathogenic | -0.301 | Destabilizing | 0.978 | D | 0.637 | neutral | None | None | None | None | N |
E/Q | 0.1925 | likely_benign | 0.2154 | benign | -0.266 | Destabilizing | 0.976 | D | 0.591 | neutral | N | 0.441145808 | None | None | N |
E/R | 0.41 | ambiguous | 0.4685 | ambiguous | 0.397 | Stabilizing | 0.978 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.2885 | likely_benign | 0.3646 | ambiguous | -0.486 | Destabilizing | 0.86 | D | 0.48 | neutral | None | None | None | None | N |
E/T | 0.3869 | ambiguous | 0.4852 | ambiguous | -0.272 | Destabilizing | 0.956 | D | 0.595 | neutral | None | None | None | None | N |
E/V | 0.4145 | ambiguous | 0.5283 | ambiguous | -0.301 | Destabilizing | 0.971 | D | 0.685 | prob.neutral | N | 0.457888295 | None | None | N |
E/W | 0.9564 | likely_pathogenic | 0.9745 | pathogenic | -0.141 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.7715 | likely_pathogenic | 0.8424 | pathogenic | -0.14 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.