Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35147 | 105664;105665;105666 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
N2AB | 33506 | 100741;100742;100743 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
N2A | 32579 | 97960;97961;97962 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
N2B | 26082 | 78469;78470;78471 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
Novex-1 | 26207 | 78844;78845;78846 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
Novex-2 | 26274 | 79045;79046;79047 | chr2:178531176;178531175;178531174 | chr2:179395903;179395902;179395901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.961 | N | 0.592 | 0.272 | 0.198526703765 | gnomAD-4.0.0 | 6.84137E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99394E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4603 | ambiguous | 0.4886 | ambiguous | -0.439 | Destabilizing | 0.97 | D | 0.594 | neutral | None | None | None | None | N |
R/C | 0.2073 | likely_benign | 0.1991 | benign | -0.416 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
R/D | 0.8525 | likely_pathogenic | 0.8576 | pathogenic | 0.008 | Stabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
R/E | 0.5036 | ambiguous | 0.5343 | ambiguous | 0.09 | Stabilizing | 0.97 | D | 0.601 | neutral | None | None | None | None | N |
R/F | 0.5975 | likely_pathogenic | 0.6139 | pathogenic | -0.55 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
R/G | 0.4134 | ambiguous | 0.4312 | ambiguous | -0.681 | Destabilizing | 0.98 | D | 0.599 | neutral | N | 0.497015959 | None | None | N |
R/H | 0.1185 | likely_benign | 0.1195 | benign | -1.09 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
R/I | 0.256 | likely_benign | 0.2853 | benign | 0.183 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
R/K | 0.1205 | likely_benign | 0.1222 | benign | -0.414 | Destabilizing | 0.122 | N | 0.333 | neutral | N | 0.478679902 | None | None | N |
R/L | 0.2831 | likely_benign | 0.3001 | benign | 0.183 | Stabilizing | 0.985 | D | 0.599 | neutral | None | None | None | None | N |
R/M | 0.3388 | likely_benign | 0.3543 | ambiguous | -0.104 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.467301909 | None | None | N |
R/N | 0.6816 | likely_pathogenic | 0.6891 | pathogenic | 0.049 | Stabilizing | 0.996 | D | 0.632 | neutral | None | None | None | None | N |
R/P | 0.9358 | likely_pathogenic | 0.9386 | pathogenic | -0.003 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
R/Q | 0.1218 | likely_benign | 0.1256 | benign | -0.155 | Destabilizing | 0.991 | D | 0.666 | neutral | None | None | None | None | N |
R/S | 0.4765 | ambiguous | 0.505 | ambiguous | -0.572 | Destabilizing | 0.961 | D | 0.592 | neutral | N | 0.496708302 | None | None | N |
R/T | 0.2329 | likely_benign | 0.2481 | benign | -0.335 | Destabilizing | 0.98 | D | 0.621 | neutral | N | 0.453722742 | None | None | N |
R/V | 0.3232 | likely_benign | 0.3431 | ambiguous | -0.003 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/W | 0.2336 | likely_benign | 0.2266 | benign | -0.388 | Destabilizing | 1.0 | D | 0.672 | neutral | N | 0.497269448 | None | None | N |
R/Y | 0.4753 | ambiguous | 0.4707 | ambiguous | -0.028 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.