Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35167 | 105724;105725;105726 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
N2AB | 33526 | 100801;100802;100803 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
N2A | 32599 | 98020;98021;98022 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
N2B | 26102 | 78529;78530;78531 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
Novex-1 | 26227 | 78904;78905;78906 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
Novex-2 | 26294 | 79105;79106;79107 | chr2:178531116;178531115;178531114 | chr2:179395843;179395842;179395841 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs1558994144 | None | 0.789 | N | 0.269 | 0.088 | 0.158396225186 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/E | rs1558994144 | None | 0.789 | N | 0.269 | 0.088 | 0.158396225186 | gnomAD-4.0.0 | 2.73654E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79879E-06 | 1.15931E-05 | 1.65634E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2087 | likely_benign | 0.1923 | benign | -0.108 | Destabilizing | 0.832 | D | 0.343 | neutral | None | None | None | None | N |
Q/C | 0.624 | likely_pathogenic | 0.567 | pathogenic | -0.055 | Destabilizing | 0.999 | D | 0.331 | neutral | None | None | None | None | N |
Q/D | 0.2877 | likely_benign | 0.2584 | benign | 0.171 | Stabilizing | 0.961 | D | 0.274 | neutral | None | None | None | None | N |
Q/E | 0.0733 | likely_benign | 0.0725 | benign | 0.162 | Stabilizing | 0.789 | D | 0.269 | neutral | N | 0.469546783 | None | None | N |
Q/F | 0.6424 | likely_pathogenic | 0.6004 | pathogenic | -0.339 | Destabilizing | 0.996 | D | 0.329 | neutral | None | None | None | None | N |
Q/G | 0.2942 | likely_benign | 0.2557 | benign | -0.287 | Destabilizing | 0.961 | D | 0.331 | neutral | None | None | None | None | N |
Q/H | 0.1774 | likely_benign | 0.1567 | benign | -0.001 | Destabilizing | 0.995 | D | 0.303 | neutral | D | 0.527461723 | None | None | N |
Q/I | 0.3265 | likely_benign | 0.3044 | benign | 0.273 | Stabilizing | 0.996 | D | 0.352 | neutral | None | None | None | None | N |
Q/K | 0.0826 | likely_benign | 0.0768 | benign | 0.102 | Stabilizing | 0.017 | N | 0.139 | neutral | N | 0.456713559 | None | None | N |
Q/L | 0.1497 | likely_benign | 0.1417 | benign | 0.273 | Stabilizing | 0.948 | D | 0.331 | neutral | N | 0.517860805 | None | None | N |
Q/M | 0.3211 | likely_benign | 0.3139 | benign | 0.196 | Stabilizing | 0.996 | D | 0.304 | neutral | None | None | None | None | N |
Q/N | 0.2314 | likely_benign | 0.2014 | benign | -0.367 | Destabilizing | 0.961 | D | 0.271 | neutral | None | None | None | None | N |
Q/P | 0.4393 | ambiguous | 0.3344 | benign | 0.174 | Stabilizing | 0.982 | D | 0.351 | neutral | N | 0.515993172 | None | None | N |
Q/R | 0.102 | likely_benign | 0.0951 | benign | 0.273 | Stabilizing | 0.028 | N | 0.161 | neutral | N | 0.474069956 | None | None | N |
Q/S | 0.2484 | likely_benign | 0.2193 | benign | -0.348 | Destabilizing | 0.832 | D | 0.299 | neutral | None | None | None | None | N |
Q/T | 0.1878 | likely_benign | 0.1749 | benign | -0.2 | Destabilizing | 0.961 | D | 0.337 | neutral | None | None | None | None | N |
Q/V | 0.2302 | likely_benign | 0.2145 | benign | 0.174 | Stabilizing | 0.961 | D | 0.365 | neutral | None | None | None | None | N |
Q/W | 0.5106 | ambiguous | 0.4689 | ambiguous | -0.371 | Destabilizing | 0.999 | D | 0.34 | neutral | None | None | None | None | N |
Q/Y | 0.4349 | ambiguous | 0.388 | ambiguous | -0.081 | Destabilizing | 0.996 | D | 0.325 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.