Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35182 | 105769;105770;105771 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
N2AB | 33541 | 100846;100847;100848 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
N2A | 32614 | 98065;98066;98067 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
N2B | 26117 | 78574;78575;78576 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
Novex-1 | 26242 | 78949;78950;78951 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
Novex-2 | 26309 | 79150;79151;79152 | chr2:178531071;178531070;178531069 | chr2:179395798;179395797;179395796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs878913505 | None | 1.0 | N | 0.694 | 0.582 | None | gnomAD-4.0.0 | 2.73654E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59756E-06 | 0 | 0 |
Y/H | rs886042549 | None | 0.999 | D | 0.643 | 0.562 | 0.481988042695 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9637 | likely_pathogenic | 0.9529 | pathogenic | -1.393 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/C | 0.8195 | likely_pathogenic | 0.7668 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.483895584 | None | None | N |
Y/D | 0.8813 | likely_pathogenic | 0.8248 | pathogenic | 0.412 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.411074483 | None | None | N |
Y/E | 0.9752 | likely_pathogenic | 0.9626 | pathogenic | 0.436 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Y/F | 0.3048 | likely_benign | 0.2628 | benign | -0.663 | Destabilizing | 0.997 | D | 0.587 | neutral | D | 0.530864601 | None | None | N |
Y/G | 0.8812 | likely_pathogenic | 0.8355 | pathogenic | -1.648 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Y/H | 0.8209 | likely_pathogenic | 0.7476 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.643 | neutral | D | 0.524765348 | None | None | N |
Y/I | 0.9564 | likely_pathogenic | 0.9473 | pathogenic | -0.685 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
Y/K | 0.9758 | likely_pathogenic | 0.9628 | pathogenic | -0.311 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/L | 0.8866 | likely_pathogenic | 0.8648 | pathogenic | -0.685 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | N |
Y/M | 0.9554 | likely_pathogenic | 0.9411 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
Y/N | 0.7044 | likely_pathogenic | 0.5993 | pathogenic | -0.488 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | N | 0.465658329 | None | None | N |
Y/P | 0.9909 | likely_pathogenic | 0.9907 | pathogenic | -0.907 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/Q | 0.9662 | likely_pathogenic | 0.9501 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
Y/R | 0.9443 | likely_pathogenic | 0.9206 | pathogenic | 0.023 | Stabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
Y/S | 0.8737 | likely_pathogenic | 0.8205 | pathogenic | -0.998 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.485764243 | None | None | N |
Y/T | 0.9595 | likely_pathogenic | 0.9391 | pathogenic | -0.88 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Y/V | 0.9156 | likely_pathogenic | 0.8987 | pathogenic | -0.907 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/W | 0.7684 | likely_pathogenic | 0.7523 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.