Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35186 | 105781;105782;105783 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
N2AB | 33545 | 100858;100859;100860 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
N2A | 32618 | 98077;98078;98079 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
N2B | 26121 | 78586;78587;78588 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
Novex-1 | 26246 | 78961;78962;78963 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
Novex-2 | 26313 | 79162;79163;79164 | chr2:178531059;178531058;178531057 | chr2:179395786;179395785;179395784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs758159045 | -2.957 | 0.739 | N | 0.819 | 0.516 | 0.502939388887 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
F/S | rs758159045 | -2.957 | 0.739 | N | 0.819 | 0.516 | 0.502939388887 | gnomAD-4.0.0 | 6.84138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49696E-06 | 5.79656E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9488 | likely_pathogenic | 0.9556 | pathogenic | -1.92 | Destabilizing | 0.345 | N | 0.785 | deleterious | None | None | None | None | N |
F/C | 0.8274 | likely_pathogenic | 0.8429 | pathogenic | -0.967 | Destabilizing | 0.97 | D | 0.852 | deleterious | N | 0.488279773 | None | None | N |
F/D | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -2.8 | Highly Destabilizing | 0.919 | D | 0.869 | deleterious | None | None | None | None | N |
F/E | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -2.588 | Highly Destabilizing | 0.789 | D | 0.857 | deleterious | None | None | None | None | N |
F/G | 0.9903 | likely_pathogenic | 0.9918 | pathogenic | -2.303 | Highly Destabilizing | 0.789 | D | 0.835 | deleterious | None | None | None | None | N |
F/H | 0.9878 | likely_pathogenic | 0.9886 | pathogenic | -2.105 | Highly Destabilizing | 0.977 | D | 0.787 | deleterious | None | None | None | None | N |
F/I | 0.5207 | ambiguous | 0.5326 | ambiguous | -0.653 | Destabilizing | 0.166 | N | 0.643 | neutral | N | 0.481584134 | None | None | N |
F/K | 0.9977 | likely_pathogenic | 0.9978 | pathogenic | -1.75 | Destabilizing | 0.789 | D | 0.849 | deleterious | None | None | None | None | N |
F/L | 0.7869 | likely_pathogenic | 0.7996 | pathogenic | -0.653 | Destabilizing | 0.001 | N | 0.355 | neutral | N | 0.329440297 | None | None | N |
F/M | 0.6931 | likely_pathogenic | 0.7057 | pathogenic | -0.639 | Destabilizing | 0.045 | N | 0.493 | neutral | None | None | None | None | N |
F/N | 0.9967 | likely_pathogenic | 0.9971 | pathogenic | -2.437 | Highly Destabilizing | 0.919 | D | 0.869 | deleterious | None | None | None | None | N |
F/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.089 | Destabilizing | 0.919 | D | 0.87 | deleterious | None | None | None | None | N |
F/Q | 0.9954 | likely_pathogenic | 0.9956 | pathogenic | -2.104 | Highly Destabilizing | 0.789 | D | 0.871 | deleterious | None | None | None | None | N |
F/R | 0.9917 | likely_pathogenic | 0.9918 | pathogenic | -2.013 | Highly Destabilizing | 0.789 | D | 0.869 | deleterious | None | None | None | None | N |
F/S | 0.9839 | likely_pathogenic | 0.9861 | pathogenic | -2.614 | Highly Destabilizing | 0.739 | D | 0.819 | deleterious | N | 0.488533263 | None | None | N |
F/T | 0.976 | likely_pathogenic | 0.9784 | pathogenic | -2.287 | Highly Destabilizing | 0.649 | D | 0.811 | deleterious | None | None | None | None | N |
F/V | 0.5288 | ambiguous | 0.5433 | ambiguous | -1.089 | Destabilizing | 0.076 | N | 0.728 | prob.delet. | N | 0.491878486 | None | None | N |
F/W | 0.8189 | likely_pathogenic | 0.8269 | pathogenic | -0.449 | Destabilizing | 0.977 | D | 0.659 | neutral | None | None | None | None | N |
F/Y | 0.5908 | likely_pathogenic | 0.6009 | pathogenic | -0.812 | Destabilizing | 0.446 | N | 0.631 | neutral | N | 0.469922029 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.